Documentation for eval_vaf_report.cwl

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Overview

Generate vaf report for concordance analysis

Docker Requirement

ubuntu:bionic

Inputs

Name	Label	Description	Type	Secondary Files
combined_vcf			File
base_normal_snv_bam_readcount_tsv			File
base_normal_indel_bam_readcount_tsv			File
base_tumor_snv_bam_readcount_tsv			File
base_tumor_indel_bam_readcount_tsv			File
query_normal_snv_bam_readcount_tsv			File
query_normal_indel_bam_readcount_tsv			File
query_tumor_snv_bam_readcount_tsv			File
query_tumor_indel_bam_readcount_tsv			File

Outputs

Name	Label	Description	Type	Secondary Files
out_file			File