tools_downsample.cwl - genome/analysis-workflows GitHub Wiki
Documentation for downsample.cwl
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Overview
downsample unaligned BAM
Docker Requirement
broadinstitute/gatk:4.1.4.1
Inputs
Name | Label | Description | Type | Secondary Files |
---|---|---|---|---|
sam | File | |||
probability | float | |||
reference | ['string', 'File'] | ['.fai', '^.dict'] | ||
random_seed | int? | |||
strategy | ['null', {'type': 'enum', 'symbols': ['HighAccuracy', 'ConstantMemory', 'Chained']}] |
Outputs
Name | Label | Description | Type | Secondary Files |
---|---|---|---|---|
downsampled_sam | File | ['.md5', '^.bai'] |