tools_combine_variants_wgs.cwl - genome/analysis-workflows GitHub Wiki
Documentation for combine_variants_wgs.cwl
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Overview
CombineVariants (GATK 3.6)
Docker Requirement
mgibio/gatk-cwl:3.6.0
Inputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| reference | ['string', 'File'] | ['.fai'] | ||
| mutect_vcf | File | ['.tbi'] | ||
| varscan_vcf | File | ['.tbi'] | ||
| strelka_vcf | File | ['.tbi'] |
Outputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| combined_vcf | File |