tools_combine_gvcfs.cwl - genome/analysis-workflows GitHub Wiki
Documentation for combine_gvcfs.cwl
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Overview
GATK CombineGVCFs
Docker Requirement
broadinstitute/gatk:4.1.8.1
Inputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| reference | ['string', 'File'] | ['.fai', '^.dict'] | ||
| gvcfs | {'type': 'array', 'items': 'File', 'inputBinding': {'prefix': '--variant'}} | |||
| output_file_name | string |
Outputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| gvcf | File | ['.tbi'] |