tools_bisulfite_qc_mapping_summary.cwl - genome/analysis-workflows GitHub Wiki
Documentation for bisulfite_qc_mapping_summary.cwl
This page is auto-generated. Do not edit.
Overview
Biscuit QC: Bisulfite conversion rate.
Docker Requirement
mgibio/biscuit:0.3.8.2
Inputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| vcf | File | |||
| bam | File | |||
| reference | string | |||
| QCannotation | File |
Outputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| strand_table | File | |||
| mapping_quality | File |