tools_agfusion.cwl - genome/analysis-workflows GitHub Wiki
Documentation for agfusion.cwl
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Overview
A tool that annotates STAR gene fusion predictions
Docker Requirement
mgibio/agfusion:1.3.1-ensembl-95
Inputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| fusion_predictions | File | |||
| agfusion_database | File | |||
| annotate_noncanonical | Annotate all gene transcripts, not just canonical isoforms | boolean? | ||
| output_dir | string? |
Outputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| annotated_fusion_predictions | Directory |