Debugging C kernels with lldb on MacOS - firedrakeproject/firedrake GitHub Wiki

When using MacOS one is, generally, forced to use lldb for debugging C code on the command line. A list of lldb commands can be found in this cheat sheet, though generally gdb commands work as expected. lldb can be used to debug C code that has been generated with Firedrake by doing the following:

1. Apply this patch to PyOP2:

diff --git a/pyop2/compilation.py b/pyop2/compilation.py
index 8fd7bf02..f5cd18b8 100644
--- a/pyop2/compilation.py
+++ b/pyop2/compilation.py
@@ -315,7 +315,7 @@ class Compiler(ABC):
         soname = os.path.join(cachedir, "%s.so" % basename)
         # Link into temporary file, then rename to shared library
         # atomically (avoiding races).
-        tmpname = os.path.join(cachedir, "%s_p%d.so.tmp" % (basename, pid))
+        # tmpname = os.path.join(cachedir, "%s_p%d.so.tmp" % (basename, pid))
 
         if configuration['check_src_hashes'] or configuration['debug']:
             matching = self.comm.allreduce(basename, op=_check_op)
@@ -347,7 +347,7 @@ class Compiler(ABC):
                     if not self.ld:
                         cc = (compiler,) \
                             + compiler_flags \
-                            + ('-o', tmpname, cname) \
+                            + ('-o', soname, cname) \
                             + self.ldflags
                         debug('Compilation command: %s', ' '.join(cc))
                         with open(logfile, "w") as log, open(errfile, "w") as err:
@@ -375,7 +375,7 @@ Compile errors in %s""" % (e.cmd, e.returncode, logfile, errfile))
                             + ('-c', '-o', oname, cname)
                         # Extract linker specific "cflags" from ldflags
                         ld = tuple(shlex.split(self.ld)) \
-                            + ('-o', tmpname, oname) \
+                            + ('-o', soname, oname) \
                             + tuple(self.expandWl(self.ldflags))
                         debug('Compilation command: %s', ' '.join(cc))
                         debug('Link command: %s', ' '.join(ld))
@@ -408,7 +408,7 @@ Unable to compile code
 Compile log in %s
 Compile errors in %s""" % (e.cmd, e.returncode, logfile, errfile))
                     # Atomically ensure soname exists
-                    os.rename(tmpname, soname)
+                    # os.rename(tmpname, soname)
             # Wait for compilation to complete
             self.comm.barrier()
             # Load resulting library

(correct as of 24th of May 2023).

To quote Lawrence, this diff

... turns off the compilation into a temp file and then renaming (which we do for parallel filesystem safety reasons) ... but that renaming defeats the debug symbol tracking on macos where the debug symbols are in a separate file from the shared library

2. Make sure the cache is empty by running firedrake-clean with the venv activated.

3. Still on the command line, switch on debugging symbols in PyOP2 and run lldb:

export PYOP2_DEBUG=1
lldb -- python script.py
breakpoint set -n name_of_function
run
continue

Note that we have to use breakpoint set -n name_of_function since our generated code will not necessarily be in the same location as our usual firedrake source code (so we can't do, say breakpoint set --file test.c --line 12 as listed in this LLDB cheat sheet). We have to set lldb running with the run command (it starts in a repl mode but knows which file it needs to run). The continue command continues after an inital stop due to exec (don't ask my why).

Reuben Nixon-Hill, 2022