aarch64 default singlecell notebook 726714a4db30 - fbnrst/sequencing-docker-stacks GitHub Wiki
- Build timestamp: 2025-03-17T19:41:39Z
- Docker image:
quay.io/fbnrst/singlecell-notebook:726714a4db30 - Docker image size: 11.4GB
- Git commit SHA: 726714a4db30c367ae03464e61b5023f7c8f22bb
- Git commit message:
Update GitHub links in manifests and wiki update scripts to point to the correct repository
Python 3.12.9
conda info:
active environment : None
user config file : /home/jovyan/.condarc
populated config files : /opt/conda/.condarc
/home/jovyan/.condarc
conda version : 25.1.1
conda-build version : not installed
python version : 3.12.9.final.0
solver : libmamba (default)
virtual packages : __archspec=1=neoverse_n2
__conda=25.1.1=0
__glibc=2.39=0
__linux=6.8.0=0
__unix=0=0
base environment : /opt/conda (writable)
conda av data dir : /opt/conda/etc/conda
conda av metadata url : None
channel URLs : https://conda.anaconda.org/conda-forge/linux-aarch64
https://conda.anaconda.org/conda-forge/noarch
https://conda.anaconda.org/bioconda/linux-aarch64
https://conda.anaconda.org/bioconda/noarch
package cache : /opt/conda/pkgs
/home/jovyan/.conda/pkgs
envs directories : /opt/conda/envs
/home/jovyan/.conda/envs
platform : linux-aarch64
user-agent : conda/25.1.1 requests/2.32.3 CPython/3.12.9 Linux/6.8.0-1021-azure ubuntu/24.04.2 glibc/2.39 solver/libmamba conda-libmamba-solver/25.1.1 libmambapy/2.0.7
UID:GID : 1000:100
netrc file : None
offline mode : False
mamba info:
libmamba version : 2.0.7
mamba version : 2.0.7
curl version : libcurl/8.12.1 OpenSSL/3.4.1 zlib/1.3.1 zstd/1.5.7 libssh2/1.11.1 nghttp2/1.64.0
libarchive version : libarchive 3.7.7 zlib/1.3.1 liblzma/5.6.3 bz2lib/1.0.8 liblz4/1.10.0 libzstd/1.5.6
envs directories : /opt/conda/envs
package cache : /opt/conda/pkgs
/home/jovyan/.mamba/pkgs
environment : base
env location : /opt/conda
user config files : /home/jovyan/.mambarc
populated config files : /home/jovyan/.condarc
/opt/conda/.condarc
virtual packages : __unix=0=0
__linux=6.8.0=0
__glibc=2.39=0
__archspec=1=aarch64
channels : https://conda.anaconda.org/conda-forge/linux-aarch64
https://conda.anaconda.org/conda-forge/noarch
https://conda.anaconda.org/bioconda/linux-aarch64
https://conda.anaconda.org/bioconda/noarch
base environment : /opt/conda
platform : linux-aarch64
mamba list:
List of packages in environment: "/opt/conda"
Name Version Build Channel
────────────────────────────────────────────────────────────────────────────────────────────────
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_r-mutex 1.0.1 anacondar_1 conda-forge
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aiosignal 1.3.2 pyhd8ed1ab_0 conda-forge
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altair 5.5.0 pyhd8ed1ab_1 conda-forge
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annotated-types 0.7.0 pyhd8ed1ab_1 conda-forge
anyio 4.8.0 pyhd8ed1ab_0 conda-forge
aom 3.9.1 hcccb83c_0 conda-forge
arboreto 0.1.6 pyh3252c3a_0 bioconda
archspec 0.2.5 pyhd8ed1ab_0 conda-forge
argcomplete 3.6.0 pyhd8ed1ab_0 conda-forge
argon2-cffi 23.1.0 pyhd8ed1ab_1 conda-forge
argon2-cffi-bindings 21.2.0 py312hb2c0f52_5 conda-forge
arpack 3.9.1 nompi_h6fc4d3a_102 conda-forge
array-api-compat 1.11.1 pyh29332c3_1 conda-forge
arrow 1.3.0 pyhd8ed1ab_1 conda-forge
asttokens 3.0.0 pyhd8ed1ab_1 conda-forge
async-lru 2.0.5 pyh29332c3_0 conda-forge
async_generator 1.10 pyhd8ed1ab_2 conda-forge
attrs 25.3.0 pyh71513ae_0 conda-forge
aws-c-auth 0.8.0 h2cb9fb3_15 conda-forge
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aws-c-common 0.10.6 h86ecc28_0 conda-forge
aws-c-compression 0.3.0 h0f0193d_5 conda-forge
aws-c-event-stream 0.5.0 hcbd8f92_11 conda-forge
aws-c-http 0.9.2 h3df160d_4 conda-forge
aws-c-io 0.15.3 hfd5ba81_6 conda-forge
aws-c-mqtt 0.11.0 h5f50e26_12 conda-forge
aws-c-s3 0.7.7 h2080895_0 conda-forge
aws-c-sdkutils 0.2.1 h0f0193d_4 conda-forge
aws-checksums 0.2.2 h0f0193d_4 conda-forge
aws-crt-cpp 0.29.7 h8a4e35f_7 conda-forge
aws-sdk-cpp 1.11.458 h849ce1a_4 conda-forge
azure-core-cpp 1.14.0 h1887c18_0 conda-forge
azure-identity-cpp 1.10.0 h47b0b28_0 conda-forge
azure-storage-blobs-cpp 12.13.0 h185ecfd_1 conda-forge
azure-storage-common-cpp 12.8.0 h1b94036_1 conda-forge
azure-storage-files-datalake-cpp 12.12.0 h37d6d07_1 conda-forge
babel 2.17.0 pyhd8ed1ab_0 conda-forge
bbknn 1.6.0 py312h187bc89_4 bioconda
beautifulsoup4 4.13.3 pyha770c72_0 conda-forge
binutils_impl_linux-aarch64 2.43 h4c662bb_4 conda-forge
bioconductor-annotate 1.80.0 r43hdfd78af_0 bioconda
bioconductor-annotationdbi 1.64.1 r43hdfd78af_0 bioconda
bioconductor-beachmat 2.18.0 r43h7d2ed04_1 bioconda
bioconductor-biobase 2.62.0 r43h1184a65_3 bioconda
bioconductor-biocgenerics 0.48.1 r43hdfd78af_2 bioconda
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bioconductor-biocparallel 1.36.0 r43h7d2ed04_2 bioconda
bioconductor-biocsingular 1.18.0 r43h7d2ed04_1 bioconda
bioconductor-biocviews 1.70.0 r43hdfd78af_0 bioconda
bioconductor-biostrings 2.70.1 r43h1184a65_2 bioconda
bioconductor-bluster 1.12.0 r43h7d2ed04_1 bioconda
bioconductor-clusterprofiler 4.10.0 r43hdfd78af_0 bioconda
bioconductor-complexheatmap 2.18.0 r43hdfd78af_0 bioconda
bioconductor-data-packages 20250105.1 hdfd78af_0 bioconda
bioconductor-delayedarray 0.28.0 r43h1184a65_2 bioconda
bioconductor-delayedmatrixstats 1.24.0 r43hdfd78af_0 bioconda
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bioconductor-fgsea 1.28.0 r43h7d2ed04_1 bioconda
bioconductor-genomeinfodb 1.38.1 r43hdfd78af_1 bioconda
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bioconductor-ggtree 3.10.0 r43hdfd78af_0 bioconda
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bioconductor-graph 1.80.0 r43h1184a65_1 bioconda
bioconductor-graphite 1.48.0 r43hdfd78af_0 bioconda
bioconductor-gseabase 1.64.0 r43hdfd78af_0 bioconda
bioconductor-hdf5array 1.30.0 r43h1184a65_1 bioconda
bioconductor-hdo.db 0.99.1 r43hdfd78af_2 bioconda
bioconductor-hsmmsinglecell 1.22.0 r43hdfd78af_0 bioconda
bioconductor-iranges 2.36.0 r43h1184a65_2 bioconda
bioconductor-keggrest 1.42.0 r43hdfd78af_0 bioconda
bioconductor-limma 3.58.1 r43h1184a65_1 bioconda
bioconductor-loomexperiment 1.20.0 r43hdfd78af_0 bioconda
bioconductor-mast 1.28.0 r43hdfd78af_0 bioconda
bioconductor-matrixgenerics 1.14.0 r43hdfd78af_3 bioconda
bioconductor-metapod 1.10.0 r43h7d2ed04_3 bioconda
bioconductor-monocle 2.30.0 r43h7d2ed04_1 bioconda
bioconductor-org.hs.eg.db 3.18.0 r43hdfd78af_0 bioconda
bioconductor-org.mm.eg.db 3.18.0 r43hdfd78af_0 bioconda
bioconductor-qvalue 2.34.0 r43hdfd78af_0 bioconda
bioconductor-rbgl 1.78.0 r43h7d2ed04_1 bioconda
bioconductor-reactome.db 1.86.2 r43hdfd78af_0 bioconda
bioconductor-reactomepa 1.46.0 r43hdfd78af_0 bioconda
bioconductor-rhdf5 2.46.1 r43h7d2ed04_1 bioconda
bioconductor-rhdf5filters 1.14.1 r43h7d2ed04_1 bioconda
bioconductor-rhdf5lib 1.24.0 r43h1184a65_2 bioconda
bioconductor-s4arrays 1.2.0 r43h1184a65_2 bioconda
bioconductor-s4vectors 0.40.2 r43h1184a65_2 bioconda
bioconductor-scaledmatrix 1.10.0 r43hdfd78af_0 bioconda
bioconductor-scater 1.30.1 r43hdfd78af_0 bioconda
bioconductor-scran 1.30.0 r43h7d2ed04_1 bioconda
bioconductor-scuttle 1.12.0 r43h7d2ed04_1 bioconda
bioconductor-singlecellexperiment 1.24.0 r43hdfd78af_0 bioconda
bioconductor-sparsearray 1.2.2 r43h1184a65_2 bioconda
bioconductor-sparsematrixstats 1.14.0 r43h7d2ed04_1 bioconda
bioconductor-summarizedexperiment 1.32.0 r43hdfd78af_0 bioconda
bioconductor-treeio 1.26.0 r43hdfd78af_1 bioconda
bioconductor-xvector 0.42.0 r43h1184a65_2 bioconda
bioconductor-zlibbioc 1.48.0 r43h1184a65_2 bioconda
biopython 1.85 py312hb2c0f52_1 conda-forge
blas 2.131 openblas conda-forge
blas-devel 3.9.0 31_h9678261_openblas conda-forge
bleach 6.2.0 pyh29332c3_4 conda-forge
bleach-with-css 6.2.0 h82add2a_4 conda-forge
blinker 1.9.0 pyhff2d567_0 conda-forge
blosc 1.21.6 hb4dfabd_1 conda-forge
bokeh 3.7.0 pyhd8ed1ab_0 conda-forge
boltons 24.0.0 pyhd8ed1ab_1 conda-forge
bottleneck 1.4.2 py312h681ec18_0 conda-forge
brotli 1.1.0 h86ecc28_2 conda-forge
brotli-bin 1.1.0 h86ecc28_2 conda-forge
brotli-python 1.1.0 py312h6f74592_2 conda-forge
brunsli 0.1 h01db608_0 conda-forge
bwidget 1.10.1 h8af1aa0_0 conda-forge
bzip2 1.0.8 h68df207_7 conda-forge
c-ares 1.34.4 h86ecc28_0 conda-forge
c-blosc2 2.15.2 h6221edb_1 conda-forge
ca-certificates 2025.1.31 hcefe29a_0 conda-forge
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cairo 1.18.4 h83712da_0 conda-forge
cellbender 0.3.0 pypi_0 pypi
celltypist 1.6.3 pyhdfd78af_0 bioconda
certifi 2025.1.31 pyhd8ed1ab_0 conda-forge
certipy 0.2.1 pyhd8ed1ab_1 conda-forge
cffi 1.17.1 py312hac81daf_0 conda-forge
charls 2.4.2 h2f0025b_0 conda-forge
charset-normalizer 3.4.1 pyhd8ed1ab_0 conda-forge
chex 0.1.88 pyhd8ed1ab_1 conda-forge
click 8.1.8 pyh707e725_0 conda-forge
cloudpickle 3.1.1 pyhd8ed1ab_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_1 conda-forge
comm 0.2.2 pyhd8ed1ab_1 conda-forge
conda 25.1.1 py312h996f985_1 conda-forge
conda-libmamba-solver 25.1.1 pyhd8ed1ab_0 conda-forge
conda-package-handling 2.4.0 pyh7900ff3_2 conda-forge
conda-package-streaming 0.11.0 pyhd8ed1ab_1 conda-forge
contourpy 1.3.1 py312h451a7dd_0 conda-forge
cpp-expected 1.1.0 h4c384f3_0 conda-forge
cpython 3.12.9 py312hd8ed1ab_1 conda-forge
cryptography 44.0.2 py312he723553_0 conda-forge
curl 8.12.1 h6702fde_0 conda-forge
cycler 0.12.1 pyhd8ed1ab_1 conda-forge
cython 3.0.12 py312hb75641d_0 conda-forge
cytoolz 1.0.1 py312h52516f5_0 conda-forge
dask 2025.2.0 pyhd8ed1ab_0 conda-forge
dask-core 2025.2.0 pyhd8ed1ab_0 conda-forge
dav1d 1.2.1 h31becfc_0 conda-forge
debugpy 1.8.13 py312h6f74592_0 conda-forge
decorator 5.2.1 pyhd8ed1ab_0 conda-forge
decoupler-py 1.8.0 pyhd8ed1ab_1 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
dill 0.3.9 pyhd8ed1ab_1 conda-forge
distributed 2025.2.0 pyhd8ed1ab_0 conda-forge
distro 1.9.0 pyhd8ed1ab_1 conda-forge
docrep 0.3.2 pyh44b312d_0 conda-forge
dunamai 1.23.0 pyhd8ed1ab_0 conda-forge
et_xmlfile 2.0.0 pyhd8ed1ab_1 conda-forge
etils 1.12.2 pyhd8ed1ab_0 conda-forge
exceptiongroup 1.2.2 pyhd8ed1ab_1 conda-forge
executing 2.1.0 pyhd8ed1ab_1 conda-forge
fastcluster 1.2.6 pypi_0 pypi
fbpca 1.0 pyhd8ed1ab_1 conda-forge
filelock 3.18.0 pyhd8ed1ab_0 conda-forge
flax 0.10.2 pyhd8ed1ab_0 conda-forge
fmt 11.0.2 h70be974_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 h77eed37_3 conda-forge
fontconfig 2.15.0 h8dda3cd_1 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.56.0 py312hcc812fe_0 conda-forge
fqdn 1.5.1 pyhd8ed1ab_1 conda-forge
freetype 2.13.3 he93130f_0 conda-forge
fribidi 1.0.10 hb9de7d4_0 conda-forge
frozendict 2.4.6 py312hb2c0f52_0 conda-forge
frozenlist 1.5.0 py312hcc812fe_1 conda-forge
fsspec 2025.3.0 pyhd8ed1ab_0 conda-forge
future 1.0.0 pyhd8ed1ab_2 conda-forge
gcc_impl_linux-aarch64 14.2.0 h39ab8d2_2 conda-forge
geosketch 1.3 pyhdfd78af_0 bioconda
get_version 3.5.5 pyhd8ed1ab_1 conda-forge
gflags 2.2.2 h5ad3122_1005 conda-forge
gfortran_impl_linux-aarch64 14.2.0 hf71498c_2 conda-forge
giflib 5.2.2 h31becfc_0 conda-forge
git 2.48.1 pl5321h0e2bd52_0 conda-forge
gitdb 4.0.12 pyhd8ed1ab_0 conda-forge
gitpython 3.1.44 pyhff2d567_0 conda-forge
glog 0.7.1 h468a4a4_0 conda-forge
glpk 5.0 h66325d0_0 conda-forge
gmp 6.3.0 h0a1ffab_2 conda-forge
gmpy2 2.1.5 py312he9d48ea_3 conda-forge
graphite2 1.3.13 h2f0025b_1003 conda-forge
greenlet 3.1.1 py312h6f74592_1 conda-forge
grpcio 1.67.1 py312h5c0e79f_0 conda-forge
gseapy 1.1.6 py312h981cfc2_0 bioconda
gsl 2.7 h294027d_0 conda-forge
gxx_impl_linux-aarch64 14.2.0 h1262d8f_2 conda-forge
h11 0.14.0 pyhd8ed1ab_1 conda-forge
h2 4.2.0 pyhd8ed1ab_0 conda-forge
h5py 3.13.0 nompi_py312h9a738b8_100 conda-forge
harfbuzz 9.0.0 hbf49d6b_1 conda-forge
harmonypy 0.0.10 pyhdfd78af_0 bioconda
hdf5 1.14.3 nompi_h6ed7ac7_109 conda-forge
hnswlib 0.8.0 py312h4f0fe26_0 conda-forge
hpack 4.1.0 pyhd8ed1ab_0 conda-forge
httpcore 1.0.7 pyh29332c3_1 conda-forge
httpx 0.28.1 pyhd8ed1ab_0 conda-forge
humanize 4.12.1 pyhd8ed1ab_0 conda-forge
hyperframe 6.1.0 pyhd8ed1ab_0 conda-forge
icu 75.1 hf9b3779_0 conda-forge
idna 3.10 pyhd8ed1ab_1 conda-forge
igraph 0.10.15 h207f3e5_1 conda-forge
imagecodecs 2024.12.30 py312he24593b_0 conda-forge
imageio 2.37.0 pyhfb79c49_0 conda-forge
importlib-metadata 8.6.1 pyha770c72_0 conda-forge
importlib_resources 6.5.2 pyhd8ed1ab_0 conda-forge
inflect 7.5.0 pyhd8ed1ab_0 conda-forge
intervaltree 3.1.0 pyhd8ed1ab_1 conda-forge
ipykernel 6.29.5 pyh3099207_0 conda-forge
ipympl 0.9.6 pyhd8ed1ab_0 conda-forge
ipython 8.34.0 pyh907856f_0 conda-forge
ipython_genutils 0.2.0 pyhd8ed1ab_2 conda-forge
ipython_pygments_lexers 1.1.1 pyhd8ed1ab_0 conda-forge
ipywidgets 8.1.5 pyhd8ed1ab_1 conda-forge
isoduration 20.11.0 pyhd8ed1ab_1 conda-forge
jax 0.4.35 pyhd8ed1ab_1 conda-forge
jaxlib 0.4.35 cpu_py312hbd99be7_0 conda-forge
jedi 0.19.2 pyhd8ed1ab_1 conda-forge
jinja2 3.1.6 pyhd8ed1ab_0 conda-forge
joblib 1.4.2 pyhd8ed1ab_1 conda-forge
jq 1.7.1 h31becfc_0 conda-forge
json5 0.10.0 pyhd8ed1ab_1 conda-forge
jsonpatch 1.33 pyhd8ed1ab_1 conda-forge
jsonpointer 3.0.0 py312h996f985_1 conda-forge
jsonschema 4.23.0 pyhd8ed1ab_1 conda-forge
jsonschema-specifications 2024.10.1 pyhd8ed1ab_1 conda-forge
jsonschema-with-format-nongpl 4.23.0 hd8ed1ab_1 conda-forge
jupyter-lsp 2.2.5 pyhd8ed1ab_1 conda-forge
jupyter-pluto-proxy 0.1.2 pyhd8ed1ab_0 conda-forge
jupyter-server-mathjax 0.2.6 pyhbbac1ac_2 conda-forge
jupyter-server-proxy 4.4.0 pyhd8ed1ab_1 conda-forge
jupyter_client 8.6.3 pyhd8ed1ab_1 conda-forge
jupyter_core 5.7.2 pyh31011fe_1 conda-forge
jupyter_events 0.12.0 pyh29332c3_0 conda-forge
jupyter_server 2.15.0 pyhd8ed1ab_0 conda-forge
jupyter_server_terminals 0.5.3 pyhd8ed1ab_1 conda-forge
jupyterhub-base 5.2.1 pyh31011fe_0 conda-forge
jupyterhub-singleuser 5.2.1 pyh31011fe_0 conda-forge
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jupyterlab_widgets 3.0.13 pyhd8ed1ab_1 conda-forge
jxrlib 1.1 h31becfc_3 conda-forge
kernel-headers_linux-aarch64 4.18.0 h05a177a_18 conda-forge
keyutils 1.6.1 h4e544f5_0 conda-forge
kiwisolver 1.4.8 py312h17cf362_0 conda-forge
krb5 1.21.3 h50a48e9_0 conda-forge
lazy-loader 0.4 pyhd8ed1ab_2 conda-forge
lazy_loader 0.4 pyhd8ed1ab_2 conda-forge
lcms2 2.17 hc88f144_0 conda-forge
ld_impl_linux-aarch64 2.43 h80caac9_4 conda-forge
legacy-api-wrap 1.4.1 pyhd8ed1ab_0 conda-forge
leidenalg 0.10.2 py312h2aa54b4_0 conda-forge
lerc 4.0.0 h4de3ea5_0 conda-forge
libabseil 20240722.0 cxx17_h18dbdb1_4 conda-forge
libaec 1.1.3 h2f0025b_0 conda-forge
libarchive 3.7.7 h6223a6c_3 conda-forge
libarrow 18.1.0 h1b535d6_6_cpu conda-forge
libarrow-acero 18.1.0 h3b568fd_6_cpu conda-forge
libarrow-dataset 18.1.0 h3b568fd_6_cpu conda-forge
libarrow-substrait 18.1.0 h3ffb4b1_6_cpu conda-forge
libavif16 1.2.0 h0528b91_1 conda-forge
libblas 3.9.0 31_h1a9f1db_openblas conda-forge
libbrotlicommon 1.1.0 h86ecc28_2 conda-forge
libbrotlidec 1.1.0 h86ecc28_2 conda-forge
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libcblas 3.9.0 31_hab92f65_openblas conda-forge
libcrc32c 1.1.2 h01db608_0 conda-forge
libcurl 8.12.1 h6702fde_0 conda-forge
libdeflate 1.23 h5e3c512_0 conda-forge
libedit 3.1.20250104 pl5321h976ea20_0 conda-forge
libev 4.33 h31becfc_2 conda-forge
libevent 2.1.12 h4ba1bb4_1 conda-forge
libexpat 2.6.4 h5ad3122_0 conda-forge
libffi 3.4.6 he21f813_0 conda-forge
libgcc 14.2.0 he277a41_2 conda-forge
libgcc-devel_linux-aarch64 14.2.0 h46490cb_102 conda-forge
libgcc-ng 14.2.0 he9431aa_2 conda-forge
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r-lintr 3.2.0 r43hc72bb7e_0 conda-forge
r-listenv 0.9.1 r43hc72bb7e_1 conda-forge
r-lme4 1.1_35.5 r43h6170684_1 conda-forge
r-lmtest 0.9_40 r43h5b510ea_3 conda-forge
r-locfit 1.5_9.12 r43habd023f_0 conda-forge
r-lubridate 1.9.4 r43hdd76399_0 conda-forge
r-magrittr 2.0.3 r43hc1cf72c_3 conda-forge
r-mass 7.3_60.0.1 r43hc1cf72c_1 conda-forge
r-matrix 1.6_5 r43h4469540_1 conda-forge
r-matrixmodels 0.5_3 r43hc72bb7e_1 conda-forge
r-matrixstats 1.5.0 r43hdd76399_0 conda-forge
r-memoise 2.0.1 r43hc72bb7e_3 conda-forge
r-mgcv 1.9_1 r43h4469540_1 conda-forge
r-microbenchmark 1.5.0 r43hdd76399_0 conda-forge
r-mime 0.12 r43hc1cf72c_3 conda-forge
r-miniui 0.1.1.1 r43hc72bb7e_1005 conda-forge
r-minqa 1.2.8 r43h80bb91a_0 conda-forge
r-modeldata 1.4.0 r43hc72bb7e_1 conda-forge
r-modelenv 0.2.0 r43hc72bb7e_0 conda-forge
r-modelmetrics 1.2.2.2 r43h6170684_4 conda-forge
r-modelr 0.1.11 r43hc72bb7e_2 conda-forge
r-munsell 0.5.1 r43hc72bb7e_1 conda-forge
r-nlme 3.1_167 r43h6e524ba_0 conda-forge
r-nloptr 2.2.1 r43h691c767_0 conda-forge
r-nnet 7.3_20 r43hdd76399_0 conda-forge
r-numderiv 2016.8_1.1 r43hc72bb7e_6 conda-forge
r-nycflights13 1.0.2 r43h785f33e_4 conda-forge
r-openssl 2.3.2 r43hdd99bf7_0 conda-forge
r-parallelly 1.42.0 r43hdd76399_0 conda-forge
r-parsnip 1.3.1 r43hc72bb7e_0 conda-forge
r-patchwork 1.3.0 r43hc72bb7e_0 conda-forge
r-pbapply 1.7_2 r43hc72bb7e_1 conda-forge
r-pbdzmq 0.3_13 r43h96295fe_0 conda-forge
r-pbkrtest 0.5.3 r43hc72bb7e_0 conda-forge
r-pheatmap 1.0.12 r43hc72bb7e_5 conda-forge
r-pillar 1.10.1 r43hc72bb7e_0 conda-forge
r-pkgbuild 1.4.6 r43hc72bb7e_0 conda-forge
r-pkgconfig 2.0.3 r43hc72bb7e_4 conda-forge
r-pkgdown 2.1.1 r43hc72bb7e_0 conda-forge
r-pkgload 1.4.0 r43hc72bb7e_0 conda-forge
r-plogr 0.2.0 r43hc72bb7e_1006 conda-forge
r-plotly 4.10.4 r43hc72bb7e_1 conda-forge
r-plyr 1.8.9 r43h6170684_1 conda-forge
r-png 0.1_8 r43hb81c312_2 conda-forge
r-polyclip 1.10_7 r43h6170684_0 conda-forge
r-polynom 1.4_1 r43hc72bb7e_3 conda-forge
r-praise 1.0.0 r43hc72bb7e_1008 conda-forge
r-prettyunits 1.2.0 r43hc72bb7e_1 conda-forge
r-proc 1.18.5 r43h6170684_1 conda-forge
r-processx 3.8.6 r43hdd76399_0 conda-forge
r-prodlim 2024.06.25 r43h6170684_1 conda-forge
r-profvis 0.4.0 r43hdd76399_0 conda-forge
r-progress 1.2.3 r43hc72bb7e_1 conda-forge
r-progressr 0.15.1 r43hc72bb7e_0 conda-forge
r-promises 1.3.2 r43h21d2c02_0 conda-forge
r-proxy 0.4_27 r43hc1cf72c_3 conda-forge
r-ps 1.8.1 r43hdd76399_0 conda-forge
r-purrr 1.0.4 r43hdd76399_0 conda-forge
r-qlcmatrix 0.9.8 r43hc72bb7e_1 conda-forge
r-quadprog 1.5_8 r43h34e7ce4_6 conda-forge
r-quantmod 0.4.26 r43hc72bb7e_1 conda-forge
r-quantreg 6.1 r43h80d6815_0 conda-forge
r-r.cache 0.16.0 r43hc72bb7e_3 conda-forge
r-r.methodss3 1.8.2 r43hc72bb7e_3 conda-forge
r-r.oo 1.27.0 r43hc72bb7e_0 conda-forge
r-r.utils 2.13.0 r43hc72bb7e_0 conda-forge
r-r6 2.6.1 r43hc72bb7e_0 conda-forge
r-ragg 1.3.3 r43h0b40734_0 conda-forge
r-randomforest 4.7_1.2 r43h6e524ba_0 conda-forge
r-rann 2.6.2 r43h21d2c02_0 conda-forge
r-rappdirs 0.3.3 r43hc1cf72c_3 conda-forge
r-rcmdcheck 1.4.0 r43h785f33e_3 conda-forge
r-rcolorbrewer 1.1_3 r43h785f33e_3 conda-forge
r-rcpp 1.0.14 r43h21d2c02_0 conda-forge
r-rcppannoy 0.0.22 r43h6170684_1 conda-forge
r-rcpparmadillo 14.2.3_1 r43h36ba1ed_0 conda-forge
r-rcppeigen 0.3.4.0.2 r43h9eb5c89_0 conda-forge
r-rcpphnsw 0.6.0 r43h6170684_1 conda-forge
r-rcppml 0.3.7 r43h9d76b47_3 conda-forge
r-rcppprogress 0.4.2 r43hc72bb7e_4 conda-forge
r-rcpptoml 0.2.3 r43h9d76b47_0 conda-forge
r-rcurl 1.98_1.16 r43ha5cee84_1 conda-forge
r-readr 2.1.5 r43h6170684_1 conda-forge
r-readxl 1.4.5 r43h1bf9921_0 conda-forge
r-recipes 1.1.1 r43hc72bb7e_0 conda-forge
r-rematch 2.0.0 r43hc72bb7e_1 conda-forge
r-rematch2 2.1.2 r43hc72bb7e_4 conda-forge
r-remotes 2.5.0 r43hc72bb7e_1 conda-forge
r-repr 1.1.7 r43h785f33e_1 conda-forge
r-reprex 2.1.1 r43hc72bb7e_1 conda-forge
r-reshape2 1.4.4 r43h6170684_4 conda-forge
r-reticulate 1.41.0.1 r43h21d2c02_0 conda-forge
r-rex 1.2.1 r43hc72bb7e_3 conda-forge
r-rjson 0.2.23 r43h9d76b47_0 conda-forge
r-rlang 1.1.5 r43h21d2c02_0 conda-forge
r-rmarkdown 2.29 r43hc72bb7e_0 conda-forge
r-rocr 1.0_11 r43h4571c7f_4 conda-forge
r-rodbc 1.3_25 r43habd023f_0 conda-forge
r-roxygen2 7.3.2 r43h6170684_1 conda-forge
r-rpart 4.1.24 r43hdd76399_0 conda-forge
r-rprojroot 2.0.4 r43hc72bb7e_1 conda-forge
r-rsample 1.2.1 r43hc72bb7e_1 conda-forge
r-rspectra 0.16_2 r43h5da6ed8_0 conda-forge
r-rsqlite 2.3.9 r43h21d2c02_0 conda-forge
r-rstatix 0.7.2 r43hc72bb7e_2 conda-forge
r-rstudioapi 0.17.1 r43hc72bb7e_0 conda-forge
r-rsvd 1.0.5 r43hc72bb7e_2 conda-forge
r-rtsne 0.17 r43h9d8d865_1 conda-forge
r-runit 0.4.33 r43hc72bb7e_1 conda-forge
r-rversions 2.1.2 r43hc72bb7e_3 conda-forge
r-rvest 1.0.4 r43hc72bb7e_1 conda-forge
r-sass 0.4.9 r43h6170684_1 conda-forge
r-scales 1.3.0 r43hc72bb7e_1 conda-forge
r-scattermore 1.2 r43h6170684_3 conda-forge
r-scatterpie 0.2.4 r43hc72bb7e_0 conda-forge
r-sctransform 0.4.1 r43h5da6ed8_1 conda-forge
r-selectr 0.4_2 r43hc72bb7e_4 conda-forge
r-sessioninfo 1.2.3 r43hc72bb7e_0 conda-forge
r-seurat 5.2.1 r43h21d2c02_0 conda-forge
r-seuratobject 5.0.2 r43h21d2c02_2 conda-forge
r-sfd 0.1.0 r43hc72bb7e_1 conda-forge
r-shadowtext 0.1.4 r43hc72bb7e_1 conda-forge
r-shape 1.4.6.1 r43ha770c72_1 conda-forge
r-shiny 1.10.0 r43h785f33e_0 conda-forge
r-sitmo 2.0.2 r43h6170684_3 conda-forge
r-slam 0.1_55 r43hb34c024_0 conda-forge
r-slider 0.3.2 r43h21d2c02_0 conda-forge
r-snow 0.4_4 r43hc72bb7e_3 conda-forge
r-sourcetools 0.1.7_1 r43h6170684_2 conda-forge
r-sp 2.2_0 r43hdd76399_0 conda-forge
r-spam 2.11_1 r43hc079609_0 conda-forge
r-sparsem 1.84_2 r43h5b510ea_0 conda-forge
r-sparsesvd 0.2_2 r43hf571b26_2 conda-forge
r-sparsevctrs 0.3.0 r43hdd76399_0 conda-forge
r-spatstat.data 3.1_6 r43hc72bb7e_0 conda-forge
r-spatstat.explore 3.3_4 r43hdd76399_0 conda-forge
r-spatstat.geom 3.3_5 r43hdd76399_0 conda-forge
r-spatstat.random 3.3_2 r43h21d2c02_0 conda-forge
r-spatstat.sparse 3.1_0 r43hc1cf72c_1 conda-forge
r-spatstat.univar 3.1_2 r43hdd76399_0 conda-forge
r-spatstat.utils 3.1_3 r43hdd76399_0 conda-forge
r-squarem 2021.1 r43hc72bb7e_3 conda-forge
r-statmod 1.5.0 r43h41730c0_2 conda-forge
r-stringi 1.8.4 r43h892b02f_3 conda-forge
r-stringr 1.5.1 r43h785f33e_1 conda-forge
r-styler 1.10.3 r43hc72bb7e_1 conda-forge
r-survival 3.8_3 r43hdd76399_0 conda-forge
r-sys 3.4.3 r43hdd76399_0 conda-forge
r-systemfonts 1.2.1 r43haae91bf_0 conda-forge
r-tensor 1.5 r43hc72bb7e_1006 conda-forge
r-testthat 3.2.3 r43h21d2c02_0 conda-forge
r-textshaping 0.4.0 r43h3f6e4a2_2 conda-forge
r-tibble 3.2.1 r43hc1cf72c_3 conda-forge
r-tidygraph 1.3.0 r43h6170684_1 conda-forge
r-tidymodels 1.3.0 r43hc72bb7e_0 conda-forge
r-tidyr 1.3.1 r43h6170684_1 conda-forge
r-tidyselect 1.2.1 r43hc72bb7e_1 conda-forge
r-tidytree 0.4.6 r43hc72bb7e_1 conda-forge
r-tidyverse 2.0.0 r43h785f33e_2 conda-forge
r-timechange 0.3.0 r43h6170684_1 conda-forge
r-timedate 4041.110 r43hc72bb7e_0 conda-forge
r-tinytex 0.56 r43hc72bb7e_0 conda-forge
r-tseries 0.10_58 r43h65a6711_0 conda-forge
r-ttr 0.24.4 r43hc1cf72c_1 conda-forge
r-tune 1.3.0 r43hc72bb7e_0 conda-forge
r-tweenr 2.0.3 r43h6170684_1 conda-forge
r-tzdb 0.4.0 r43h6170684_2 conda-forge
r-urca 1.3_4 r43h5b510ea_1 conda-forge
r-urlchecker 1.0.1 r43hc72bb7e_3 conda-forge
r-usethis 3.1.0 r43hc72bb7e_0 conda-forge
r-utf8 1.2.4 r43hc1cf72c_1 conda-forge
r-uuid 1.2_1 r43hc1cf72c_0 conda-forge
r-uwot 0.2.3 r43h21d2c02_0 conda-forge
r-vctrs 0.6.5 r43h6170684_1 conda-forge
r-vgam 1.1_13 r43ha805bf2_0 conda-forge
r-vipor 0.4.7 r43hc72bb7e_1 conda-forge
r-viridis 0.6.5 r43hc72bb7e_1 conda-forge
r-viridislite 0.4.2 r43hc72bb7e_2 conda-forge
r-vroom 1.6.5 r43h6170684_1 conda-forge
r-waldo 0.6.1 r43hc72bb7e_0 conda-forge
r-warp 0.2.1 r43hc1cf72c_1 conda-forge
r-whisker 0.4.1 r43hc72bb7e_2 conda-forge
r-withr 3.0.2 r43hc72bb7e_0 conda-forge
r-workflows 1.2.0 r43hc72bb7e_0 conda-forge
r-workflowsets 1.1.0 r43h785f33e_1 conda-forge
r-writexl 1.5.1 r43hdd76399_0 conda-forge
r-xfun 0.51 r43h21d2c02_0 conda-forge
r-xml 3.99_0.17 r43hed34aec_2 conda-forge
r-xml2 1.3.8 r43hd000c85_0 conda-forge
r-xmlparsedata 1.0.5 r43hc72bb7e_3 conda-forge
r-xopen 1.0.1 r43hc72bb7e_1 conda-forge
r-xtable 1.8_4 r43hc72bb7e_6 conda-forge
r-xts 0.14.1 r43hdd76399_0 conda-forge
r-yaml 2.3.10 r43hc1cf72c_0 conda-forge
r-yardstick 1.3.2 r43hdd76399_0 conda-forge
r-yulab.utils 0.2.0 r43hc72bb7e_0 conda-forge
r-zip 2.3.2 r43hdd76399_0 conda-forge
r-zoo 1.8_13 r43hdd76399_0 conda-forge
rav1e 0.6.6 h1d8f897_2 conda-forge
re2 2024.07.02 haa97905_2 conda-forge
readline 8.2 h8382b9d_2 conda-forge
referencing 0.36.2 pyh29332c3_0 conda-forge
reproc 14.2.4.post0 h31becfc_1 conda-forge
reproc-cpp 14.2.4.post0 h2f0025b_1 conda-forge
requests 2.32.3 pyhd8ed1ab_1 conda-forge
requests_cache 0.4.13 py_0 conda-forge
rfc3339-validator 0.1.4 pyhd8ed1ab_1 conda-forge
rfc3986-validator 0.1.1 pyh9f0ad1d_0 conda-forge
rich 13.9.4 pyhd8ed1ab_1 conda-forge
rpds-py 0.23.1 py312he7a34ca_0 conda-forge
rpy2 3.5.11 py312r43h3e17d05_3 conda-forge
ruamel.yaml 0.18.10 py312hb2c0f52_0 conda-forge
ruamel.yaml.clib 0.2.8 py312hb2c0f52_1 conda-forge
s2n 1.5.11 h3caee7a_0 conda-forge
scanorama 1.7.4 pyhdfd78af_0 bioconda
scanpy 1.11.0 pyhd8ed1ab_0 conda-forge
scikit-image 0.25.2 py312ha2895bd_0 conda-forge
scikit-learn 1.5.2 py312h2605d20_1 conda-forge
scipy 1.15.2 py312hb5459e8_0 conda-forge
scrublet 0.2.3 pyh5e36f6f_1 bioconda
scvelo 0.3.3 pyhd8ed1ab_0 conda-forge
scvi-tools 1.3.0 pyhd8ed1ab_0 conda-forge
seaborn 0.13.2 hd8ed1ab_3 conda-forge
seaborn-base 0.13.2 pyhd8ed1ab_3 conda-forge
sed 4.8 ha0d5d3d_0 conda-forge
send2trash 1.8.3 pyh0d859eb_1 conda-forge
session-info 1.0.0 pyhd8ed1ab_0 conda-forge
session-info2 0.1.2 pyhd8ed1ab_0 conda-forge
setuptools 75.8.2 pyhff2d567_0 conda-forge
simdjson 3.12.2 h17cf362_0 conda-forge
simpervisor 1.0.0 pyhd8ed1ab_1 conda-forge
simplegeneric 0.8.1 pyhd8ed1ab_2 conda-forge
six 1.17.0 pyhd8ed1ab_0 conda-forge
sleef 3.8 h8fb0607_0 conda-forge
smmap 5.0.2 pyhd8ed1ab_0 conda-forge
snappy 1.2.1 hd4fb6f5_1 conda-forge
sniffio 1.3.1 pyhd8ed1ab_1 conda-forge
sortedcontainers 2.4.0 pyhd8ed1ab_1 conda-forge
soupsieve 2.5 pyhd8ed1ab_1 conda-forge
sparse 0.15.5 pyh72ffeb9_0 conda-forge
spdlog 1.15.1 hc4929b9_0 conda-forge
sqlalchemy 2.0.39 py312h52516f5_1 conda-forge
stack_data 0.6.3 pyhd8ed1ab_1 conda-forge
statsmodels 0.14.4 py312h681ec18_0 conda-forge
stdlib-list 0.11.1 pyhd8ed1ab_0 conda-forge
svt-av1 3.0.1 h5ad3122_0 conda-forge
sympy 1.13.3 pyh2585a3b_105 conda-forge
sysroot_linux-aarch64 2.17 h68829e0_18 conda-forge
tapi 1300.6.5 h1d056c8_0 conda-forge
tbb 2022.0.0 h243be18_0 conda-forge
tblib 3.0.0 pyhd8ed1ab_1 conda-forge
tensorboard 2.19.0 pyhd8ed1ab_0 conda-forge
tensorboard-data-server 0.7.0 py312hbefda5e_2 conda-forge
tensorstore 0.1.65 py312h5c15f48_4 conda-forge
terminado 0.18.1 pyh0d859eb_0 conda-forge
texttable 1.7.0 pyhd8ed1ab_1 conda-forge
threadpoolctl 3.6.0 pyhecae5ae_0 conda-forge
tifffile 2025.3.13 pyhd8ed1ab_0 conda-forge
tinycss2 1.4.0 pyhd8ed1ab_0 conda-forge
tk 8.6.13 h194ca79_0 conda-forge
tktable 2.10 h52f7bd3_6 conda-forge
toml 0.10.2 pyhd8ed1ab_1 conda-forge
tomli 2.2.1 pyhd8ed1ab_1 conda-forge
tomlkit 0.13.2 pyha770c72_1 conda-forge
toolz 1.0.0 pyhd8ed1ab_1 conda-forge
torchmetrics 1.6.3 pyhd8ed1ab_0 conda-forge
tornado 6.4.2 py312h52516f5_0 conda-forge
tqdm 4.67.1 pyhd8ed1ab_1 conda-forge
traitlets 5.14.3 pyhd8ed1ab_1 conda-forge
truststore 0.10.1 pyh29332c3_0 conda-forge
typeguard 4.4.2 pyhd8ed1ab_0 conda-forge
types-python-dateutil 2.9.0.20241206 pyhd8ed1ab_0 conda-forge
typing-extensions 4.12.2 hd8ed1ab_1 conda-forge
typing_extensions 4.12.2 pyha770c72_1 conda-forge
typing_utils 0.1.0 pyhd8ed1ab_1 conda-forge
tzdata 2025a h78e105d_0 conda-forge
tzlocal 5.3 py312h996f985_0 conda-forge
umap-learn 0.5.7 py312h996f985_1 conda-forge
unicodedata2 16.0.0 py312hb2c0f52_0 conda-forge
unixodbc 2.3.12 h7b6a552_0 conda-forge
uri-template 1.3.0 pyhd8ed1ab_1 conda-forge
urllib3 2.3.0 pyhd8ed1ab_0 conda-forge
wcwidth 0.2.13 pyhd8ed1ab_1 conda-forge
webcolors 24.11.1 pyhd8ed1ab_0 conda-forge
webencodings 0.5.1 pyhd8ed1ab_3 conda-forge
websocket-client 1.8.0 pyhd8ed1ab_1 conda-forge
werkzeug 3.1.3 pyhd8ed1ab_1 conda-forge
wheel 0.45.1 pyhd8ed1ab_1 conda-forge
widgetsnbextension 4.0.13 pyhd8ed1ab_1 conda-forge
wrapt 1.17.2 py312hb2c0f52_0 conda-forge
xarray 2025.1.2 pyhd8ed1ab_0 conda-forge
xlrd 2.0.1 pyhd8ed1ab_3 conda-forge
xmltodict 0.14.2 pyhd8ed1ab_1 conda-forge
xorg-libice 1.1.2 h86ecc28_0 conda-forge
xorg-libsm 1.2.6 h0808dbd_0 conda-forge
xorg-libx11 1.8.12 hca56bd8_0 conda-forge
xorg-libxau 1.0.12 h86ecc28_0 conda-forge
xorg-libxdmcp 1.1.5 h57736b2_0 conda-forge
xorg-libxext 1.3.6 h57736b2_0 conda-forge
xorg-libxrender 0.9.12 h86ecc28_0 conda-forge
xorg-libxt 1.3.1 h57736b2_0 conda-forge
xyzservices 2025.1.0 pyhd8ed1ab_0 conda-forge
xz 5.6.4 h2dbfc1b_0 conda-forge
xz-gpl-tools 5.6.4 h2dbfc1b_0 conda-forge
xz-tools 5.6.4 h86ecc28_0 conda-forge
yaml 0.2.5 hf897c2e_2 conda-forge
yaml-cpp 0.8.0 h2f0025b_0 conda-forge
yarl 1.18.3 py312hcc812fe_1 conda-forge
yq 3.4.3 pyhd8ed1ab_1 conda-forge
zeromq 4.3.5 h5efb499_7 conda-forge
zfp 1.0.1 h5ad3122_2 conda-forge
zict 3.0.0 pyhd8ed1ab_1 conda-forge
zipp 3.21.0 pyhd8ed1ab_1 conda-forge
zlib 1.3.1 h86ecc28_2 conda-forge
zlib-ng 2.2.4 hf428078_0 conda-forge
zstandard 0.23.0 py312hb2c0f52_1 conda-forge
zstd 1.5.7 hbcf94c1_1 conda-forge
apt list --installed:
WARNING: apt does not have a stable CLI interface. Use with caution in scripts.
Listing...
adduser/now 3.137ubuntu1 all [installed,local]
apt/now 2.7.14build2 arm64 [installed,local]
base-files/now 13ubuntu10.2 arm64 [installed,local]
base-passwd/now 3.6.3build1 arm64 [installed,local]
bash/now 5.2.21-2ubuntu4 arm64 [installed,local]
binutils-aarch64-linux-gnu/now 2.42-4ubuntu2.4 arm64 [installed,local]
binutils-common/now 2.42-4ubuntu2.4 arm64 [installed,local]
binutils/now 2.42-4ubuntu2.4 arm64 [installed,local]
bsdutils/now 1:2.39.3-9ubuntu6.2 arm64 [installed,local]
build-essential/now 12.10ubuntu1 arm64 [installed,local]
bzip2/now 1.0.8-5.1build0.1 arm64 [installed,local]
ca-certificates/now 20240203 all [installed,local]
cm-super-minimal/now 0.3.4-17 all [installed,local]
cm-super/now 0.3.4-17 all [installed,local]
coreutils/now 9.4-3ubuntu6 arm64 [installed,local]
cpp-13-aarch64-linux-gnu/now 13.3.0-6ubuntu2~24.04 arm64 [installed,local]
cpp-13/now 13.3.0-6ubuntu2~24.04 arm64 [installed,local]
cpp-aarch64-linux-gnu/now 4:13.2.0-7ubuntu1 arm64 [installed,local]
cpp/now 4:13.2.0-7ubuntu1 arm64 [installed,local]
curl/now 8.5.0-2ubuntu10.6 arm64 [installed,local]
dash/now 0.5.12-6ubuntu5 arm64 [installed,local]
debconf/now 1.5.86ubuntu1 all [installed,local]
debianutils/now 5.17build1 arm64 [installed,local]
diffutils/now 1:3.10-1build1 arm64 [installed,local]
dpkg-dev/now 1.22.6ubuntu6.1 all [installed,local]
dpkg/now 1.22.6ubuntu6.1 arm64 [installed,local]
dvipng/now 1.15-1.1 arm64 [installed,local]
e2fsprogs/now 1.47.0-2.4~exp1ubuntu4.1 arm64 [installed,local]
ffmpeg/now 7:6.1.1-3ubuntu5 arm64 [installed,local]
findutils/now 4.9.0-5build1 arm64 [installed,local]
fontconfig-config/now 2.15.0-1.1ubuntu2 arm64 [installed,local]
fontconfig/now 2.15.0-1.1ubuntu2 arm64 [installed,local]
fonts-dejavu-core/now 2.37-8 all [installed,local]
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fonts-dejavu-mono/now 2.37-8 all [installed,local]
fonts-dejavu/now 2.37-8 all [installed,local]
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g++-13-aarch64-linux-gnu/now 13.3.0-6ubuntu2~24.04 arm64 [installed,local]
g++-13/now 13.3.0-6ubuntu2~24.04 arm64 [installed,local]
g++-aarch64-linux-gnu/now 4:13.2.0-7ubuntu1 arm64 [installed,local]
g++/now 4:13.2.0-7ubuntu1 arm64 [installed,local]
gcc-13-aarch64-linux-gnu/now 13.3.0-6ubuntu2~24.04 arm64 [installed,local]
gcc-13-base/now 13.3.0-6ubuntu2~24.04 arm64 [installed,local]
gcc-13/now 13.3.0-6ubuntu2~24.04 arm64 [installed,local]
gcc-14-base/now 14.2.0-4ubuntu2~24.04 arm64 [installed,local]
gcc-aarch64-linux-gnu/now 4:13.2.0-7ubuntu1 arm64 [installed,local]
gcc/now 4:13.2.0-7ubuntu1 arm64 [installed,local]
gfortran-13-aarch64-linux-gnu/now 13.3.0-6ubuntu2~24.04 arm64 [installed,local]
gfortran-13/now 13.3.0-6ubuntu2~24.04 arm64 [installed,local]
gfortran-aarch64-linux-gnu/now 4:13.2.0-7ubuntu1 arm64 [installed,local]
gfortran/now 4:13.2.0-7ubuntu1 arm64 [installed,local]
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libuuid1/now 2.39.3-9ubuntu6.2 arm64 [installed,local]
libva-drm2/now 2.20.0-2build1 arm64 [installed,local]
libva-x11-2/now 2.20.0-2build1 arm64 [installed,local]
libva2/now 2.20.0-2build1 arm64 [installed,local]
libvdpau1/now 1.5-2build1 arm64 [installed,local]
libvidstab1.1/now 1.1.0-2build1 arm64 [installed,local]
libvorbis0a/now 1.3.7-1build3 arm64 [installed,local]
libvorbisenc2/now 1.3.7-1build3 arm64 [installed,local]
libvorbisfile3/now 1.3.7-1build3 arm64 [installed,local]
libvpx9/now 1.14.0-1ubuntu2.1 arm64 [installed,local]
libvulkan1/now 1.3.275.0-1build1 arm64 [installed,local]
libwayland-client0/now 1.22.0-2.1build1 arm64 [installed,local]
libwayland-cursor0/now 1.22.0-2.1build1 arm64 [installed,local]
libwayland-egl1/now 1.22.0-2.1build1 arm64 [installed,local]
libwayland-server0/now 1.22.0-2.1build1 arm64 [installed,local]
libwebp7/now 1.3.2-0.4build3 arm64 [installed,local]
libwebpmux3/now 1.3.2-0.4build3 arm64 [installed,local]
libx11-6/now 2:1.8.7-1build1 arm64 [installed,local]
libx11-data/now 2:1.8.7-1build1 all [installed,local]
libx11-xcb1/now 2:1.8.7-1build1 arm64 [installed,local]
libx264-164/now 2:0.164.3108+git31e19f9-1 arm64 [installed,local]
libx265-199/now 3.5-2build1 arm64 [installed,local]
libxau6/now 1:1.0.9-1build6 arm64 [installed,local]
libxaw7/now 2:1.0.14-1build2 arm64 [installed,local]
libxcb-dri2-0/now 1.15-1ubuntu2 arm64 [installed,local]
libxcb-dri3-0/now 1.15-1ubuntu2 arm64 [installed,local]
libxcb-glx0/now 1.15-1ubuntu2 arm64 [installed,local]
libxcb-present0/now 1.15-1ubuntu2 arm64 [installed,local]
libxcb-randr0/now 1.15-1ubuntu2 arm64 [installed,local]
libxcb-render0/now 1.15-1ubuntu2 arm64 [installed,local]
libxcb-shape0/now 1.15-1ubuntu2 arm64 [installed,local]
libxcb-shm0/now 1.15-1ubuntu2 arm64 [installed,local]
libxcb-sync1/now 1.15-1ubuntu2 arm64 [installed,local]
libxcb-xfixes0/now 1.15-1ubuntu2 arm64 [installed,local]
libxcb1/now 1.15-1ubuntu2 arm64 [installed,local]
libxcursor1/now 1:1.2.1-1build1 arm64 [installed,local]
libxdmcp6/now 1:1.1.3-0ubuntu6 arm64 [installed,local]
libxext6/now 2:1.3.4-1build2 arm64 [installed,local]
libxfixes3/now 1:6.0.0-2build1 arm64 [installed,local]
libxi6/now 2:1.8.1-1build1 arm64 [installed,local]
libxkbcommon0/now 1.6.0-1build1 arm64 [installed,local]
libxml2/now 2.9.14+dfsg-1.3ubuntu3.2 arm64 [installed,local]
libxmu6/now 2:1.1.3-3build2 arm64 [installed,local]
libxpm4/now 1:3.5.17-1build2 arm64 [installed,local]
libxrandr2/now 2:1.5.2-2build1 arm64 [installed,local]
libxrender1/now 1:0.9.10-1.1build1 arm64 [installed,local]
libxshmfence1/now 1.3-1build5 arm64 [installed,local]
libxss1/now 1:1.2.3-1build3 arm64 [installed,local]
libxt6t64/now 1:1.2.1-1.2build1 arm64 [installed,local]
libxv1/now 2:1.0.11-1.1build1 arm64 [installed,local]
libxvidcore4/now 2:1.3.7-1build1 arm64 [installed,local]
libxxf86vm1/now 1:1.1.4-1build4 arm64 [installed,local]
libxxhash0/now 0.8.2-2build1 arm64 [installed,local]
libyaml-0-2/now 0.2.5-1build1 arm64 [installed,local]
libzimg2/now 3.0.5+ds1-1build1 arm64 [installed,local]
libzix-0-0/now 0.4.2-2build1 arm64 [installed,local]
libzmq5/now 4.3.5-1build2 arm64 [installed,local]
libzstd1/now 1.5.5+dfsg2-2build1.1 arm64 [installed,local]
libzvbi-common/now 0.2.42-2 all [installed,local]
libzvbi0t64/now 0.2.42-2 arm64 [installed,local]
libzzip-0-13t64/now 0.13.72+dfsg.1-1.2build1 arm64 [installed,local]
linux-libc-dev/now 6.8.0-55.57 arm64 [installed,local]
locales/now 2.39-0ubuntu8.4 all [installed,local]
login/now 1:4.13+dfsg1-4ubuntu3.2 arm64 [installed,local]
logsave/now 1.47.0-2.4~exp1ubuntu4.1 arm64 [installed,local]
lto-disabled-list/now 47 all [installed,local]
make/now 4.3-4.1build2 arm64 [installed,local]
mawk/now 1.3.4.20240123-1build1 arm64 [installed,local]
media-types/now 10.1.0 all [installed,local]
mesa-libgallium/now 24.2.8-1ubuntu1~24.04.1 arm64 [installed,local]
mount/now 2.39.3-9ubuntu6.2 arm64 [installed,local]
nano-tiny/now 7.2-2ubuntu0.1 arm64 [installed,local]
ncurses-base/now 6.4+20240113-1ubuntu2 all [installed,local]
ncurses-bin/now 6.4+20240113-1ubuntu2 arm64 [installed,local]
netbase/now 6.4 all [installed,local]
ocl-icd-libopencl1/now 2.3.2-1build1 arm64 [installed,local]
openssh-client/now 1:9.6p1-3ubuntu13.8 arm64 [installed,local]
openssl/now 3.0.13-0ubuntu3.5 arm64 [installed,local]
pandoc-data/now 3.1.3-1 all [installed,local]
pandoc/now 3.1.3+ds-2 arm64 [installed,local]
passwd/now 1:4.13+dfsg1-4ubuntu3.2 arm64 [installed,local]
patch/now 2.7.6-7build3 arm64 [installed,local]
perl-base/now 5.38.2-3.2build2.1 arm64 [installed,local]
perl-modules-5.38/now 5.38.2-3.2build2.1 all [installed,local]
perl/now 5.38.2-3.2build2.1 arm64 [installed,local]
pfb2t1c2pfb/now 0.3-11build1 arm64 [installed,local]
poppler-data/now 0.4.12-1 all [installed,local]
preview-latex-style/now 13.2-1 all [installed,local]
procps/now 2:4.0.4-4ubuntu3.2 arm64 [installed,local]
python3-minimal/now 3.12.3-0ubuntu2 arm64 [installed,local]
python3.12-minimal/now 3.12.3-1ubuntu0.5 arm64 [installed,local]
python3.12/now 3.12.3-1ubuntu0.5 arm64 [installed,local]
python3/now 3.12.3-0ubuntu2 arm64 [installed,local]
readline-common/now 8.2-4build1 all [installed,local]
rpcsvc-proto/now 1.4.2-0ubuntu7 arm64 [installed,local]
run-one/now 1.17-0ubuntu2 all [installed,local]
sed/now 4.9-2build1 arm64 [installed,local]
sensible-utils/now 0.0.22 all [installed,local]
shared-mime-info/now 2.4-4 arm64 [installed,local]
sudo/now 1.9.15p5-3ubuntu5 arm64 [installed,local]
sysvinit-utils/now 3.08-6ubuntu3 arm64 [installed,local]
t1utils/now 1.41-4build3 arm64 [installed,local]
tar/now 1.35+dfsg-3build1 arm64 [installed,local]
teckit/now 2.5.12+ds1-1 arm64 [installed,local]
tex-common/now 6.18 all [installed,local]
texlive-base/now 2023.20240207-1 all [installed,local]
texlive-binaries/now 2023.20230311.66589-9build3 arm64 [installed,local]
texlive-fonts-recommended/now 2023.20240207-1 all [installed,local]
texlive-latex-base/now 2023.20240207-1 all [installed,local]
texlive-latex-extra/now 2023.20240207-1 all [installed,local]
texlive-latex-recommended/now 2023.20240207-1 all [installed,local]
texlive-pictures/now 2023.20240207-1 all [installed,local]
texlive-plain-generic/now 2023.20240207-1 all [installed,local]
texlive-xetex/now 2023.20240207-1 all [installed,local]
tini/now 0.19.0-1 arm64 [installed,local]
tipa/now 2:1.3-21 all [installed,local]
tzdata/now 2024b-0ubuntu0.24.04.1 all [installed,local]
ubuntu-keyring/now 2023.11.28.1 all [installed,local]
ucf/now 3.0043+nmu1 all [installed,local]
unminimize/now 0.2.1 arm64 [installed,local]
unzip/now 6.0-28ubuntu4.1 arm64 [installed,local]
util-linux/now 2.39.3-9ubuntu6.2 arm64 [installed,local]
vim-common/now 2:9.1.0016-1ubuntu7.6 all [installed,local]
vim-tiny/now 2:9.1.0016-1ubuntu7.6 arm64 [installed,local]
wget/now 1.21.4-1ubuntu4.1 arm64 [installed,local]
x11-common/now 1:7.7+23ubuntu3 all [installed,local]
xclip/now 0.13-3 arm64 [installed,local]
xdg-utils/now 1.1.3-4.1ubuntu3 all [installed,local]
xfonts-encodings/now 1:1.0.5-0ubuntu2 all [installed,local]
xfonts-utils/now 1:7.7+6build3 arm64 [installed,local]
xkb-data/now 2.41-2ubuntu1.1 all [installed,local]
xz-utils/now 5.6.1+really5.4.5-1build0.1 arm64 [installed,local]
zlib1g/now 1:1.3.dfsg-3.1ubuntu2.1 arm64 [installed,local]
R --version:
R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-conda-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under the terms of the
GNU General Public License versions 2 or 3.
For more information about these matters see
https://www.gnu.org/licenses/.
R --silent -e 'installed.packages(.Library)[, c(1,3)]':
> installed.packages(.Library)[, c(1,3)]
Package Version
abind "abind" "1.4-5"
annotate "annotate" "1.80.0"
AnnotationDbi "AnnotationDbi" "1.64.1"
ape "ape" "5.8-1"
aplot "aplot" "0.2.5"
askpass "askpass" "1.2.1"
assertthat "assertthat" "0.2.1"
backports "backports" "1.5.0"
base "base" "4.3.3"
base64enc "base64enc" "0.1-3"
beachmat "beachmat" "2.18.0"
beeswarm "beeswarm" "0.4.0"
BH "BH" "1.87.0-1"
Biobase "Biobase" "2.62.0"
BiocGenerics "BiocGenerics" "0.48.1"
BiocIO "BiocIO" "1.12.0"
BiocManager "BiocManager" "1.30.25"
BiocNeighbors "BiocNeighbors" "1.20.0"
BiocParallel "BiocParallel" "1.36.0"
BiocSingular "BiocSingular" "1.18.0"
biocViews "biocViews" "1.70.0"
Biostrings "Biostrings" "2.70.1"
bit "bit" "4.6.0"
bit64 "bit64" "4.6.0-1"
bitops "bitops" "1.0-9"
blob "blob" "1.2.4"
bluster "bluster" "1.12.0"
boot "boot" "1.3-31"
brew "brew" "1.0-10"
brio "brio" "1.1.5"
broom "broom" "1.0.7"
broom.helpers "broom.helpers" "1.20.0"
bslib "bslib" "0.9.0"
cachem "cachem" "1.1.0"
Cairo "Cairo" "1.6-2"
callr "callr" "3.7.6"
car "car" "3.1-3"
carData "carData" "3.0-5"
cards "cards" "0.5.1"
caret "caret" "6.0-94"
caTools "caTools" "1.18.3"
cellranger "cellranger" "1.1.0"
circlize "circlize" "0.4.16"
class "class" "7.3-23"
cli "cli" "3.6.4"
clipr "clipr" "0.8.0"
clock "clock" "0.7.1"
clue "clue" "0.3-66"
cluster "cluster" "2.1.8.1"
clusterProfiler "clusterProfiler" "4.10.0"
codetools "codetools" "0.2-20"
collections "collections" "0.3.7"
colorspace "colorspace" "2.1-1"
combinat "combinat" "0.0-8"
commonmark "commonmark" "1.9.2"
compiler "compiler" "4.3.3"
ComplexHeatmap "ComplexHeatmap" "2.18.0"
conflicted "conflicted" "1.2.0"
conquer "conquer" "1.3.3"
corrplot "corrplot" "0.95"
cowplot "cowplot" "1.1.3"
cpp11 "cpp11" "0.5.2"
crayon "crayon" "1.5.3"
credentials "credentials" "2.0.2"
crosstalk "crosstalk" "1.2.1"
curl "curl" "6.2.1"
cyclocomp "cyclocomp" "1.1.1"
data.table "data.table" "1.17.0"
datasets "datasets" "4.3.3"
DBI "DBI" "1.2.3"
dbplyr "dbplyr" "2.5.0"
DDRTree "DDRTree" "0.1.5"
DelayedArray "DelayedArray" "0.28.0"
DelayedMatrixStats "DelayedMatrixStats" "1.24.0"
deldir "deldir" "2.0-4"
Deriv "Deriv" "4.1.6"
desc "desc" "1.4.3"
devtools "devtools" "2.4.5"
diagram "diagram" "1.6.5"
dials "dials" "1.4.0"
DiceDesign "DiceDesign" "1.10"
diffobj "diffobj" "0.3.5"
digest "digest" "0.6.37"
doBy "doBy" "4.6.25"
docopt "docopt" "0.7.1"
doFuture "doFuture" "1.0.2"
doParallel "doParallel" "1.0.17"
DOSE "DOSE" "3.28.1"
dotCall64 "dotCall64" "1.2"
downlit "downlit" "0.4.4"
downloader "downloader" "0.4"
dplyr "dplyr" "1.1.4"
dqrng "dqrng" "0.3.2"
dtplyr "dtplyr" "1.3.1"
e1071 "e1071" "1.7-16"
edgeR "edgeR" "4.0.16"
ellipsis "ellipsis" "0.3.2"
enrichplot "enrichplot" "1.22.0"
evaluate "evaluate" "1.0.3"
fansi "fansi" "1.0.6"
farver "farver" "2.1.2"
fastDummies "fastDummies" "1.7.5"
fastICA "fastICA" "1.2-7"
fastmap "fastmap" "1.2.0"
fastmatch "fastmatch" "1.1-6"
fgsea "fgsea" "1.28.0"
fitdistrplus "fitdistrplus" "1.2-2"
FNN "FNN" "1.1.4.1"
fontawesome "fontawesome" "0.5.3"
forcats "forcats" "1.0.0"
foreach "foreach" "1.5.2"
forecast "forecast" "8.23.0"
formatR "formatR" "1.14"
Formula "Formula" "1.2-5"
fracdiff "fracdiff" "1.5-3"
fs "fs" "1.6.5"
furrr "furrr" "0.3.1"
futile.logger "futile.logger" "1.4.3"
futile.options "futile.options" "1.0.1"
future "future" "1.34.0"
future.apply "future.apply" "1.11.3"
gargle "gargle" "1.5.2"
generics "generics" "0.1.3"
GenomeInfoDb "GenomeInfoDb" "1.38.1"
GenomeInfoDbData "GenomeInfoDbData" "1.2.11"
GenomicRanges "GenomicRanges" "1.54.1"
gert "gert" "2.1.4"
GetoptLong "GetoptLong" "1.0.5"
GGally "GGally" "2.2.1"
ggbeeswarm "ggbeeswarm" "0.7.2"
ggforce "ggforce" "0.4.2"
ggfun "ggfun" "0.1.8"
ggnewscale "ggnewscale" "0.5.1"
ggplot2 "ggplot2" "3.5.1"
ggplotify "ggplotify" "0.1.2"
ggpubr "ggpubr" "0.6.0"
ggraph "ggraph" "2.2.1"
ggrastr "ggrastr" "1.0.2"
ggrepel "ggrepel" "0.9.6"
ggridges "ggridges" "0.5.6"
ggsci "ggsci" "3.2.0"
ggsignif "ggsignif" "0.6.4"
ggstats "ggstats" "0.9.0"
ggtree "ggtree" "3.10.0"
gh "gh" "1.4.1"
gitcreds "gitcreds" "0.1.2"
GlobalOptions "GlobalOptions" "0.1.2"
globals "globals" "0.16.3"
glue "glue" "1.8.0"
GO.db "GO.db" "3.18.0"
goftest "goftest" "1.2-3"
googledrive "googledrive" "2.1.1"
googlesheets4 "googlesheets4" "1.1.1"
GOSemSim "GOSemSim" "2.28.0"
gower "gower" "1.0.1"
GPfit "GPfit" "1.0-8"
gplots "gplots" "3.2.0"
graph "graph" "1.80.0"
graphics "graphics" "4.3.3"
graphite "graphite" "1.48.0"
graphlayouts "graphlayouts" "1.2.2"
grDevices "grDevices" "4.3.3"
grid "grid" "4.3.3"
gridExtra "gridExtra" "2.3"
gridGraphics "gridGraphics" "0.5-1"
GSEABase "GSEABase" "1.64.0"
gson "gson" "0.1.0"
gtable "gtable" "0.3.6"
gtools "gtools" "3.9.5"
hardhat "hardhat" "1.4.1"
haven "haven" "2.5.4"
HDF5Array "HDF5Array" "1.30.0"
HDO.db "HDO.db" "0.99.1"
here "here" "1.0.1"
hexbin "hexbin" "1.28.5"
highr "highr" "0.11"
hms "hms" "1.1.3"
HSMMSingleCell "HSMMSingleCell" "1.22.0"
htmltools "htmltools" "0.5.8.1"
htmlwidgets "htmlwidgets" "1.6.4"
httpuv "httpuv" "1.6.15"
httr "httr" "1.4.7"
httr2 "httr2" "1.1.1"
ica "ica" "1.0-3"
ids "ids" "1.0.1"
igraph "igraph" "2.0.3"
infer "infer" "1.0.7"
ini "ini" "0.3.1"
ipred "ipred" "0.9-15"
IRanges "IRanges" "2.36.0"
IRdisplay "IRdisplay" "1.1"
IRkernel "IRkernel" "1.3.2"
irlba "irlba" "2.3.5.1"
isoband "isoband" "0.2.7"
iterators "iterators" "1.0.14"
jquerylib "jquerylib" "0.1.4"
jsonlite "jsonlite" "1.9.1"
KEGGREST "KEGGREST" "1.42.0"
KernSmooth "KernSmooth" "2.23-26"
knitr "knitr" "1.49"
labeling "labeling" "0.4.3"
labelled "labelled" "2.14.0"
lambda.r "lambda.r" "1.2.4"
languageserver "languageserver" "0.3.16"
later "later" "1.4.1"
lattice "lattice" "0.22-6"
lava "lava" "1.8.1"
lazyeval "lazyeval" "0.2.2"
leidenbase "leidenbase" "0.1.32"
lhs "lhs" "1.2.0"
lifecycle "lifecycle" "1.0.4"
limma "limma" "3.58.1"
lintr "lintr" "3.2.0"
listenv "listenv" "0.9.1"
lme4 "lme4" "1.1-35.5"
lmtest "lmtest" "0.9-40"
locfit "locfit" "1.5-9.12"
LoomExperiment "LoomExperiment" "1.20.0"
lubridate "lubridate" "1.9.4"
magrittr "magrittr" "2.0.3"
MASS "MASS" "7.3-60.0.1"
MAST "MAST" "1.28.0"
Matrix "Matrix" "1.6-5"
MatrixGenerics "MatrixGenerics" "1.14.0"
MatrixModels "MatrixModels" "0.5-3"
matrixStats "matrixStats" "1.5.0"
memoise "memoise" "2.0.1"
metapod "metapod" "1.10.0"
methods "methods" "4.3.3"
mgcv "mgcv" "1.9-1"
microbenchmark "microbenchmark" "1.5.0"
mime "mime" "0.12"
miniUI "miniUI" "0.1.1.1"
minqa "minqa" "1.2.8"
modeldata "modeldata" "1.4.0"
modelenv "modelenv" "0.2.0"
ModelMetrics "ModelMetrics" "1.2.2.2"
modelr "modelr" "0.1.11"
monocle "monocle" "2.30.0"
munsell "munsell" "0.5.1"
nlme "nlme" "3.1-167"
nloptr "nloptr" "2.2.1"
nnet "nnet" "7.3-20"
numDeriv "numDeriv" "2016.8-1.1"
nycflights13 "nycflights13" "1.0.2"
openssl "openssl" "2.3.2"
org.Hs.eg.db "org.Hs.eg.db" "3.18.0"
org.Mm.eg.db "org.Mm.eg.db" "3.18.0"
parallel "parallel" "4.3.3"
parallelly "parallelly" "1.42.0"
parsnip "parsnip" "1.3.1"
patchwork "patchwork" "1.3.0"
pbapply "pbapply" "1.7-2"
pbdZMQ "pbdZMQ" "0.3-13"
pbkrtest "pbkrtest" "0.5.3"
pheatmap "pheatmap" "1.0.12"
pillar "pillar" "1.10.1"
pkgbuild "pkgbuild" "1.4.6"
pkgconfig "pkgconfig" "2.0.3"
pkgdown "pkgdown" "2.1.1"
pkgload "pkgload" "1.4.0"
plogr "plogr" "0.2.0"
plotly "plotly" "4.10.4"
plyr "plyr" "1.8.9"
png "png" "0.1-8"
polyclip "polyclip" "1.10-7"
polynom "polynom" "1.4-1"
praise "praise" "1.0.0"
prettyunits "prettyunits" "1.2.0"
pROC "pROC" "1.18.5"
processx "processx" "3.8.6"
prodlim "prodlim" "2024.06.25"
profvis "profvis" "0.4.0"
progress "progress" "1.2.3"
progressr "progressr" "0.15.1"
promises "promises" "1.3.2"
proxy "proxy" "0.4-27"
ps "ps" "1.8.1"
purrr "purrr" "1.0.4"
qlcMatrix "qlcMatrix" "0.9.8"
quadprog "quadprog" "1.5-8"
quantmod "quantmod" "0.4.26"
quantreg "quantreg" "6.1"
qvalue "qvalue" "2.34.0"
R.cache "R.cache" "0.16.0"
R.methodsS3 "R.methodsS3" "1.8.2"
R.oo "R.oo" "1.27.0"
R.utils "R.utils" "2.13.0"
R6 "R6" "2.6.1"
ragg "ragg" "1.3.3"
randomForest "randomForest" "4.7-1.2"
RANN "RANN" "2.6.2"
rappdirs "rappdirs" "0.3.3"
RBGL "RBGL" "1.78.0"
rcmdcheck "rcmdcheck" "1.4.0"
RColorBrewer "RColorBrewer" "1.1-3"
Rcpp "Rcpp" "1.0.14"
RcppAnnoy "RcppAnnoy" "0.0.22"
RcppArmadillo "RcppArmadillo" "14.2.3-1"
RcppEigen "RcppEigen" "0.3.4.0.2"
RcppHNSW "RcppHNSW" "0.6.0"
RcppML "RcppML" "0.3.7"
RcppProgress "RcppProgress" "0.4.2"
RcppTOML "RcppTOML" "0.2.3"
RCurl "RCurl" "1.98-1.16"
reactome.db "reactome.db" "1.86.2"
ReactomePA "ReactomePA" "1.46.0"
readr "readr" "2.1.5"
readxl "readxl" "1.4.5"
recipes "recipes" "1.1.1"
rematch "rematch" "2.0.0"
rematch2 "rematch2" "2.1.2"
remotes "remotes" "2.5.0"
repr "repr" "1.1.7"
reprex "reprex" "2.1.1"
reshape2 "reshape2" "1.4.4"
reticulate "reticulate" "1.41.0.1"
rex "rex" "1.2.1"
rhdf5 "rhdf5" "2.46.1"
rhdf5filters "rhdf5filters" "1.14.1"
Rhdf5lib "Rhdf5lib" "1.24.0"
rjson "rjson" "0.2.23"
rlang "rlang" "1.1.5"
rmarkdown "rmarkdown" "2.29"
ROCR "ROCR" "1.0-11"
RODBC "RODBC" "1.3-25"
roxygen2 "roxygen2" "7.3.2"
rpart "rpart" "4.1.24"
rprojroot "rprojroot" "2.0.4"
rsample "rsample" "1.2.1"
RSpectra "RSpectra" "0.16-2"
RSQLite "RSQLite" "2.3.9"
rstatix "rstatix" "0.7.2"
rstudioapi "rstudioapi" "0.17.1"
rsvd "rsvd" "1.0.5"
Rtsne "Rtsne" "0.17"
RUnit "RUnit" "0.4.33"
rversions "rversions" "2.1.2"
rvest "rvest" "1.0.4"
S4Arrays "S4Arrays" "1.2.0"
S4Vectors "S4Vectors" "0.40.2"
sass "sass" "0.4.9"
ScaledMatrix "ScaledMatrix" "1.10.0"
scales "scales" "1.3.0"
scater "scater" "1.30.1"
scattermore "scattermore" "1.2"
scatterpie "scatterpie" "0.2.4"
sceasy "sceasy" "0.0.7"
scran "scran" "1.30.0"
sctransform "sctransform" "0.4.1"
scuttle "scuttle" "1.12.0"
selectr "selectr" "0.4-2"
sessioninfo "sessioninfo" "1.2.3"
Seurat "Seurat" "5.2.1"
SeuratObject "SeuratObject" "5.0.2"
sfd "sfd" "0.1.0"
shadowtext "shadowtext" "0.1.4"
shape "shape" "1.4.6.1"
shiny "shiny" "1.10.0"
SingleCellExperiment "SingleCellExperiment" "1.24.0"
sitmo "sitmo" "2.0.2"
slam "slam" "0.1-55"
slider "slider" "0.3.2"
snow "snow" "0.4-4"
sourcetools "sourcetools" "0.1.7-1"
sp "sp" "2.2-0"
spam "spam" "2.11-1"
SparseArray "SparseArray" "1.2.2"
SparseM "SparseM" "1.84-2"
sparseMatrixStats "sparseMatrixStats" "1.14.0"
sparsesvd "sparsesvd" "0.2-2"
sparsevctrs "sparsevctrs" "0.3.0"
spatstat.data "spatstat.data" "3.1-6"
spatstat.explore "spatstat.explore" "3.3-4"
spatstat.geom "spatstat.geom" "3.3-5"
spatstat.random "spatstat.random" "3.3-2"
spatstat.sparse "spatstat.sparse" "3.1-0"
spatstat.univar "spatstat.univar" "3.1-2"
spatstat.utils "spatstat.utils" "3.1-3"
splines "splines" "4.3.3"
SQUAREM "SQUAREM" "2021.1"
statmod "statmod" "1.5.0"
stats "stats" "4.3.3"
stats4 "stats4" "4.3.3"
stringi "stringi" "1.8.4"
stringr "stringr" "1.5.1"
styler "styler" "1.10.3"
SummarizedExperiment "SummarizedExperiment" "1.32.0"
survival "survival" "3.8-3"
sys "sys" "3.4.3"
systemfonts "systemfonts" "1.2.1"
tcltk "tcltk" "4.3.3"
tensor "tensor" "1.5"
testthat "testthat" "3.2.3"
textshaping "textshaping" "0.4.0"
tibble "tibble" "3.2.1"
tidygraph "tidygraph" "1.3.0"
tidymodels "tidymodels" "1.3.0"
tidyr "tidyr" "1.3.1"
tidyselect "tidyselect" "1.2.1"
tidytree "tidytree" "0.4.6"
tidyverse "tidyverse" "2.0.0"
timechange "timechange" "0.3.0"
timeDate "timeDate" "4041.110"
tinytex "tinytex" "0.56"
tools "tools" "4.3.3"
treeio "treeio" "1.26.0"
tseries "tseries" "0.10-58"
TTR "TTR" "0.24.4"
tune "tune" "1.3.0"
tweenr "tweenr" "2.0.3"
tzdb "tzdb" "0.4.0"
urca "urca" "1.3-4"
urlchecker "urlchecker" "1.0.1"
usethis "usethis" "3.1.0"
utf8 "utf8" "1.2.4"
utils "utils" "4.3.3"
uuid "uuid" "1.2-1"
uwot "uwot" "0.2.3"
vctrs "vctrs" "0.6.5"
VGAM "VGAM" "1.1-13"
vipor "vipor" "0.4.7"
viridis "viridis" "0.6.5"
viridisLite "viridisLite" "0.4.2"
vroom "vroom" "1.6.5"
waldo "waldo" "0.6.1"
warp "warp" "0.2.1"
whisker "whisker" "0.4.1"
withr "withr" "3.0.2"
workflows "workflows" "1.2.0"
workflowsets "workflowsets" "1.1.0"
writexl "writexl" "1.5.1"
xfun "xfun" "0.51"
XML "XML" "3.99-0.17"
xml2 "xml2" "1.3.8"
xmlparsedata "xmlparsedata" "1.0.5"
xopen "xopen" "1.0.1"
xtable "xtable" "1.8-4"
xts "xts" "0.14.1"
XVector "XVector" "0.42.0"
yaml "yaml" "2.3.10"
yardstick "yardstick" "1.3.2"
yulab.utils "yulab.utils" "0.2.0"
zip "zip" "2.3.2"
zlibbioc "zlibbioc" "1.48.0"
zoo "zoo" "1.8-13"
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