Installing and upgrading the techsupport tools - dyim42/SMRT-Analysis GitHub Wiki

The technical support tools are packaged as an add-on to SMRT Analysis and must be initially installed manually for version 2.1.1 and 2.2. They will be included as part of the 2.3 and later versions. Note that these installs and upgrades can be performed at any time (they are independent of and therefore will not affect the SMRT Analysis install).

To install the tools for 2.1.1 or 2.2, perform the following commands as the SMRT_USER (the user used to install and run SMRT Analysis) on your SMRT Analysis node:

wget https://s3.amazonaws.com/files.pacb.com/software/smrtanalysis/2.2.0/smrtanalysis-addon-support_2.2.0.140931.run
SMRT_ROOT=<your smrtanalysis installation root dir>
$SMRT_ROOT/admin/bin/smrtupdater smrtanalysis-addon-support_2.2.0.140931.run
$SMRT_ROOT/admin/bin/techsupport --action get_techsupport_update

To upgrade the techsupport tools for any version:

$SMRT_ROOT/admin/bin/techsupport --action get_techsupport_update