Cytoscape Web vs Desktop Feature Comparison - cytoscape/cytoscape-web GitHub Wiki
| Annotation | Meaning |
|---|---|
| ✅ | Fully Supported |
| ☑️ | Partially Supported |
| ❌ | Not Supported |
| 🌐 | Link to Cytoscape Web Manual |
| 🖥️ | Link to Cytoscape Desktop Manual |
| Functionality Category | Cytoscape Web | Cytoscape Desktop | Manual Link |
|---|---|---|---|
| Access to External Databases | ✅ | ✅ | |
| Analysis Tools | ❌ | ✅ | 🖥️ |
| Annotations | ☑️ | ✅ | 🖥️ |
| Apps | ✅1 | ✅ | 🌐 🖥️ |
| App Store | ❌ | ✅ | 🖥️ |
| Element Group | ❌ | ✅ | |
| Element Selection | ☑️ | ✅ | |
| Export | ☑️ | ✅ | 🌐 🖥️ |
| Filters | ☑️ | ✅ | 🖥️ |
| Hierarchical Network & Cell View | ✅ | ❌ | |
| Import | ☑️ | ✅ | 🌐 🖥️ |
| Layout | ☑️ | ✅ | 🖥️ |
| Layout Tools | ☑️ | ✅ | 🖥️ |
| Network Analyzer | ❌ | ✅ | 🖥️ |
| Network Editing & Operation | ☑️ | ✅ | |
| Network Visualization | ✅ | ✅ | 🖥️ |
| Session | ❌ | ✅ | 🖥️ |
| Table Editing | ✅ | ✅ | 🌐 🖥️ |
| Undo/Redo | ❌2 | ✅ | 🖥️ |
| Visual Styles | ✅ | ✅ | 🌐 🖥️ |
| Workspace | ✅ | ❌ | 🌐 |
- Both the web and desktop versions support external apps, but they use different app frameworks.
- This feature is currently under development.