snpEff - christianparobek/cambodiaWGS GitHub Wiki

#####Building the Databases snpEff is a java program downloaded to my ~ space at Kure. I made my own DBs for Pf3D7v13 and PvSAL1v13. Followed these instructions.

#####23 September 2015 Using snpEff to subset into effect types for a look at the allele frequency spectra by SNP type.