ProgramsForBuilding3dMolecules - ccdc-opensource/dash GitHub Wiki
Popular choices are:
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Chem3D Ultra - http://www.cambridgesoft.com/products/
It must be emphasised that you should examine the model created by such programs carefully. It is quite possible to build a model that has poor bond-lengths and angles, which actually prevent you from solving the structure. If in doubt always check the Cambridge Structural Database.