User Interface Overview - bvshvarf/bvshvarf.github.io GitHub Wiki

User Interface Overview

Author: James Gillis

Welcome to the User Interface Overview for DataSeq. This page provides a guided tour of the main areas of the web application so that you can understand where to go and what each section is designed to help you with.


Pre-Processing Page

Pre-Processing Interface Screenshot

This is the starting point for users working with raw sequencing data. From this page, you can:

  • Upload your FASTQ files
  • Select the type of data (e.g., RNA-seq, ATAC-seq, WGBS)
  • Create and upload your config file
  • Begin the automated pre-processing pipeline

User Manual for Pre-Processing Interface here


Account Page

Account Interface Screenshot

This page is the first page a user will be presented with. On this page, you can manage how you log in or use the system:

  • Register for a new account (Currently not implemented)
  • Log in with an existing account (Currently not implemented)
  • Or choose to continue as a guest

User Manual for Account Interface here


Downloads Page

Incomplete Downloads Interface Screenshot

Once your files have been processed, you can use the Downloads page to:

  • View a list of completed preprocessing jobs
  • Download your processed FASTQ files with the provided ID from the pre-processing interface
  • Download your processed FASTQ files (DataSeq Users will do this without an ID)

User Manual for Downloads Interface here


Feedback and Support Page

Feedback and Support Interface Screenshot

If you have questions, encounter problems, or want to send feedback, this is the place to go:

  • Submit a support request
  • View frequently asked questions
  • Leave suggestions or report issues

User Manual for Feedback and Support Interface here