build failures - bioconda/bioconda-recipes GitHub Wiki

Build failures

Automatically updated (nightly) list of build failures that currently block builds from the listed recipes. Please help with fixing them!

recipe downloads depending skiplisted category build failures pull requests
recipes/perl-list-moreutils-xs 1047890 485 True osx-64 show
recipes/perl-html-parser 400355 187 True osx-64 show
recipes/k8 634340 183 True CI unresponsive, compiler error linux-aarch64, osx-64 show
recipes/perl-html-tidy 158447 138 True osx-64 show
recipes/pasta 32272 122 True test failure, test failure linux-64, osx-64 show
recipes/perl-bio-samtools 211373 109 True osx-64 show
recipes/dialign-tx 17543 109 True , linux-64, osx-64 show
recipes/spades 413885 45 True CI unresponsive, compiler error linux-aarch64, osx-64 show
recipes/tbl2asn-forever 65633 24 True osx-64 show
recipes/sorted_nearest 129723 19 True test failure osx-64 show
recipes/flye 146748 14 True , , linux-64, linux-aarch64, osx-64 show
recipes/pyopenms 31413 13 True , linux-64, osx-64 show
recipes/perl-extutils-cppguess 23863 13 True osx-64 show
recipes/perl-set-intervaltree 110515 12 True osx-64 show
recipes/perl-datetime 26134 12 True osx-64 show
recipes/libgtextutils 55134 9 True osx-64 show
recipes/medaka 244330 8 True dependency issue, dependency issue linux-64, osx-64 show
recipes/lofreq 66894 8 True test failure osx-64 show
recipes/fastx_toolkit 66319 8 True osx-64 show
recipes/perl-scalar-util-numeric 37167 7 True osx-64 show
recipes/perl-data-uuid 21817 7 True osx-64 show
recipes/perl-template-toolkit 158697 6 True osx-64 show
recipes/whatshap 164892 5 True dependency issue, dependency issue linux-64, linux-aarch64 show
recipes/khmer 68684 5 True compiler error linux-64 show
recipes/perl-inline-c 19898 5 True osx-64 show
recipes/perl-bio-bigfile 8021 5 True osx-64 show
recipes/perl-sub-attribute 7676 5 True osx-64 show
recipes/glimmerhmm 162935 4 True compiler error osx-64 show
recipes/bioconductor-lpsymphony 54459 4 True linux-64 show
recipes/repeatscout 23261 4 True , linux-64, osx-64 show
recipes/libmems 12096 4 True compiler error linux-64 show
recipes/rapsearch 11295 4 True compiler error linux-64 show
recipes/hhsuite 262907 3 True compiler error osx-64 show
recipes/seqfu 126341 3 True compiler error osx-64 show
recipes/moabs 77542 3 True compiler error, compiler error linux-64, osx-64 show
recipes/bioconductor-ihw 43819 3 True linux-64 show
recipes/python-hyphy-python 28698 3 True compiler error osx-64 show
recipes/bioconductor-enrichedheatmap 25633 3 True compiler error osx-64 show
recipes/kcounter 15862 3 True compiler error linux-64 show
recipes/perl-class-methodmaker 14935 3 True osx-64 show
recipes/mauvealigner 11456 3 True compiler error linux-64 show
recipes/libsbml 6961 3 True compiler error linux-64 show
recipes/usher 237906 2 True compiler error, compiler error, compiler error linux-64, linux-aarch64, osx-64 show
recipes/libsequence 52477 2 True linux-64 show
recipes/libsequence/1.8.4 52477 2 True linux-64 show
recipes/dinopy 47229 2 True dependency issue, dependency issue, dependency issue linux-64, linux-aarch64, osx-64 show
recipes/plastid 27732 2 True osx-64 show
recipes/modeltest-ng 15264 2 True osx-64 show
recipes/python-hppy 14939 2 True dependency issue osx-64 show
recipes/sga 13690 2 True compiler error osx-64 show
recipes/vmatch 13254 2 True linux-64 show
recipes/ms2pip 12873 2 True , linux-64, osx-64 show
recipes/wise2 7110 2 True osx-64 show
recipes/sonlib 6628 2 True compiler error osx-64 show
recipes/jcvi 137160 1 True disk space, disk space linux-64, linux-aarch64 show
recipes/gimmemotifs 129680 1 True , linux-64, osx-64 show
recipes/tobias 95832 1 True compiler error osx-64 show
recipes/mothur 89161 1 True linux-64 show
recipes/bamread 56567 1 True compiler error osx-64 show
recipes/mykrobe 56443 1 True linux-aarch64 show
recipes/phispy 52628 1 True osx-64 show
recipes/rscape 37609 1 True osx-64 show
recipes/mbg 34068 1 True osx-64 show
recipes/genmap 31200 1 True , linux-64, osx-64 show
recipes/cgat-apps 28918 1 True dependency issue, dependency issue linux-64, osx-64 show
recipes/sqt 28386 1 True dependency issue, dependency issue linux-64, osx-64 show
recipes/maxentpy 25582 1 True compiler error, compiler error linux-64, osx-64 show
recipes/rnablueprint 24884 1 True compiler error, compiler error linux-64, osx-64 show
recipes/msisensor-pro 22579 1 True linux-64 show
recipes/htstream 22214 1 True compiler error osx-64 show
recipes/glimmer 14521 1 True linux-64 show
recipes/bioconductor-distinct 13336 1 True compiler error, compiler error linux-64, osx-64 show
recipes/perl-forks 13119 1 True osx-64 show
recipes/bioconductor-rcwlpipelines 12945 1 True dependency issue linux-64 show
recipes/yahmm 12762 1 True compiler error, compiler error linux-64, osx-64 show
recipes/cuttlefish 8826 1 True osx-64 show
recipes/dragmap 8682 1 True linux-64 show
recipes/mccortex 8680 1 True , linux-64, osx-64 show
recipes/mnnpy 8374 1 True dependency issue, dependency issue linux-64, osx-64 show
recipes/transrate-tools 7384 1 True linux-64 show
recipes/divvier 6942 1 True linux-64 show
recipes/tgsgapcloser 6915 1 True osx-64 show
recipes/curves 6559 1 True compiler error osx-64 show
recipes/biolite-tools 6391 1 True osx-64 show
recipes/kwip 5923 1 True linux-64 show
recipes/godmd 5619 1 True , linux-64, osx-64 show
recipes/pywfa 4875 1 True , checksum mismatch linux-64, osx-64 show
recipes/bioconductor-cepo 4026 1 True linux-64 show
recipes/nextpolish 2659 1 True compiler error osx-64 show
recipes/pywgsim 2448 1 True compiler error linux-64 show
recipes/libshorah 1911 1 True , linux-64, osx-64 show
recipes/unifrac 514616 0 True test failure, test failure linux-64, osx-64 show
recipes/fwdpy11 201187 0 True osx-64 show
recipes/perl-convert-binary-c 157007 0 True osx-64 show
recipes/perl-aceperl 153161 0 True osx-64 show
recipes/stacks 130594 0 True linux-64 show
recipes/gemini 101464 0 True dependency issue, dependency issue, dependency issue linux-64, linux-aarch64, osx-64 show
recipes/umis 101170 0 True osx-64 show
recipes/mikado 90880 0 True , linux-64, osx-64 show
recipes/alfred 84768 0 True osx-64 show
recipes/rsem 77326 0 True , linux-64, osx-64 show
recipes/cdna_cupcake 77311 0 True , linux-64, osx-64 show
recipes/jbrowse 71020 0 True linux-64 show
recipes/dunovo 61243 0 True linux-64 show
recipes/rmats 49049 0 True osx-64 show
recipes/parascopy 48230 0 True linux-64 show
recipes/krakenuniq 45731 0 True osx-64 show
recipes/iced 43048 0 True , linux-64, osx-64 show
recipes/nanovar 41814 0 True dependency issue linux-64 show
recipes/bioconductor-metahdep 40571 0 True compiler error osx-64 show
recipes/bioconductor-netpathminer 40245 0 True osx-64 show
recipes/coinfinder 37663 0 True osx-64 show
recipes/gangstr 37090 0 True , linux-64, osx-64 show
recipes/expansionhunter 35244 0 True osx-64 show
recipes/regenie 34322 0 True osx-64 show
recipes/portcullis 32863 0 True linux-64 show
recipes/gat 31006 0 True , linux-64, osx-64 show
recipes/dart 30401 0 True osx-64 show
recipes/ataqv 30391 0 True test failure, compiler error linux-64, osx-64 show
recipes/bioconductor-cytoml 29114 0 True osx-64 show
recipes/ragout 28358 0 True osx-64 show
recipes/verifybamid2 27590 0 True osx-64 show
recipes/fibertools-rs 27272 0 True linux-64 show
recipes/albatradis 26969 0 True linux-64 show
recipes/simlord 26644 0 True , linux-64, osx-64 show
recipes/bioconductor-inspect 26444 0 True compiler error linux-64 show
recipes/bioconductor-deepbluer 25273 0 True linux-64 show
recipes/bioconductor-ccfindr 25188 0 True osx-64 show
recipes/samwell 25145 0 True , linux-64, osx-64 show
recipes/starseqr 25020 0 True , linux-64, osx-64 show
recipes/bioconductor-ideal 24220 0 True dependency issue linux-64 show
recipes/bioconductor-sictools 24024 0 True compiler error linux-64 show
recipes/pheniqs 23274 0 True , linux-64, osx-64 show
recipes/bioconductor-ihwpaper 23220 0 True , dependency issue linux-64, osx-64 show
recipes/strling 22940 0 True linux-64 show
recipes/pymvpa 22521 0 True , linux-64, osx-64 show
recipes/medicc2 22003 0 True osx-64 show
recipes/r-histonehmm 21077 0 True linux-64 show
recipes/hera 20369 0 True conda/mamba bug linux-64 show
recipes/graphtyper 20357 0 True linux-64 show
recipes/cellsnp-lite 20137 0 True osx-64 show
recipes/rustybam 20101 0 True osx-64 show
recipes/taxonomy 19944 0 True osx-64 show
recipes/guidescan 18229 0 True osx-64 show
recipes/kart 18034 0 True osx-64 show
recipes/abra2 17631 0 True linux-64 show
recipes/bioconductor-interactivedisplay 17481 0 True linux-64 show
recipes/rmats2sashimiplot 17218 0 True linux-64 show
recipes/ma 17032 0 True linux-64 show
recipes/bioconductor-tweedeseqcountdata 16621 0 True source download error linux-64 show
recipes/bioconductor-ccpromise 16417 0 True linux-64 show
recipes/sequenza-utils 16147 0 True osx-64 show
recipes/dicey 16097 0 True , , linux-64, linux-aarch64, osx-64 show
recipes/treemix 15809 0 True osx-64 show
recipes/magicblast 14213 0 True , linux-64, osx-64 show
recipes/tiptoft 14175 0 True , linux-64, osx-64 show
recipes/pegasuspy 14119 0 True , linux-64, osx-64 show
recipes/matchtigs 14031 0 True , linux-64, osx-64 show
recipes/grafimo 13860 0 True linux-64 show
recipes/faqcs 13787 0 True osx-64 show
recipes/pydnase 13555 0 True , linux-64, osx-64 show
recipes/chia-rep 13493 0 True , linux-64, osx-64 show
recipes/strainge 13258 0 True , linux-64, osx-64 show
recipes/sicer2 13183 0 True , linux-64, osx-64 show
recipes/phyloacc 13130 0 True osx-64 show
recipes/pourrna 12846 0 True osx-64 show
recipes/interproscan 12728 0 True linux-64 show
recipes/wally 12726 0 True , linux-64, osx-64 show
recipes/chorus2 12720 0 True dependency issue, dependency issue linux-64, osx-64 show
recipes/tadbit 12271 0 True , linux-64, osx-64 show
recipes/methylpy 12195 0 True , linux-64, osx-64 show
recipes/pytrimal 12028 0 True osx-64 show
recipes/kmasker 11533 0 True , linux-64, osx-64 show
recipes/ghm 11435 0 True linux-64 show
recipes/bolt 11418 0 True linux-64 show
recipes/pxblat 11402 0 True , linux-64, osx-64 show
recipes/perl-config-autoconf 11339 0 True osx-64 show
recipes/pyfba 11253 0 True , linux-64, osx-64 show
recipes/genblastg 11022 0 True , linux-64, osx-64 show
recipes/perl-atlas-modules 10579 0 True , linux-64, osx-64 show
recipes/bwread 10562 0 True osx-64 show
recipes/r-enchantr 10536 0 True linux-64 show
recipes/bte 10518 0 True , linux-64, osx-64 show
recipes/cellprofiler 10394 0 True , linux-64, osx-64 show
recipes/telseq 10244 0 True osx-64 show
recipes/bioconductor-scclassify 9822 0 True linux-64 show
recipes/igblast-parser 9697 0 True , linux-64, osx-64 show
recipes/sansa 9678 0 True osx-64 show
recipes/ryuto 9393 0 True , linux-64, osx-64 show
recipes/dropest 9329 0 True linux-64 show
recipes/secedo 9143 0 True , linux-64, osx-64 show
recipes/appspam 9059 0 True linux-64 show
recipes/cassiopee 8978 0 True osx-64 show
recipes/anise_basil 8955 0 True osx-64 show
recipes/telescope 8953 0 True , linux-64, osx-64 show
recipes/perl-crypt-openssl-rsa 8803 0 True osx-64 show
recipes/mockinbird 8518 0 True , linux-64, osx-64 show
recipes/hapog 8508 0 True osx-64 show
recipes/gapfiller 8316 0 True linux-64 show
recipes/commet 8298 0 True osx-64 show
recipes/ogdf 8205 0 True linux-64 show
recipes/desman 8039 0 True linux-64 show
recipes/opencontactcli 7784 0 True linux-64 show
recipes/nwalign3 7730 0 True , linux-64, osx-64 show
recipes/bioconductor-biggr 7669 0 True dependency issue linux-64 show
recipes/cytocad 7496 0 True linux-64 show
recipes/perl-indirect 7147 0 True osx-64 show
recipes/perl-cairo 7093 0 True osx-64 show
recipes/perl-json-create 7076 0 True osx-64 show
recipes/r-eacon 7041 0 True linux-64 show
recipes/ccat 6869 0 True , linux-64, osx-64 show
recipes/hiddendomains 6866 0 True linux-64 show
recipes/dawg 6696 0 True dependency issue linux-64 show
recipes/epicseg 6654 0 True , linux-64, osx-64 show
recipes/prinseq-plus-plus 6484 0 True osx-64 show
recipes/resmico 6423 0 True , linux-64, osx-64 show
recipes/baitfisher 6282 0 True osx-64 show
recipes/r-boutroslabplottinggeneral 6277 0 True osx-64 show
recipes/bioconductor-pdatk 6119 0 True test failure linux-64 show
recipes/bioconductor-condiments 6083 0 True linux-64 show
recipes/ac-diamond 6009 0 True linux-64 show
recipes/mosaicatcher 6004 0 True , linux-64, osx-64 show
recipes/sherpas 5981 0 True osx-64 show
recipes/fgwas 5967 0 True osx-64 show
recipes/r-velocyto.r 5953 0 True osx-64 show
recipes/chips 5931 0 True osx-64 show
recipes/bcov 5925 0 True osx-64 show
recipes/hictk 5842 0 True , linux-aarch64, osx-64 show
recipes/pirs 5809 0 True linux-64 show
recipes/velvet-sc 5797 0 True linux-64 show
recipes/fastphylo 5715 0 True , linux-64, osx-64 show
recipes/sequali 5708 0 True osx-64 show
recipes/moss 5703 0 True linux-64 show
recipes/trinculo 5630 0 True linux-64 show
recipes/matlock 5601 0 True osx-64 show
recipes/satsuma2 5446 0 True linux-64 show
recipes/xhmm 5387 0 True linux-64 show
recipes/nerpa 5337 0 True , linux-64, osx-64 show
recipes/pyopal 5335 0 True osx-64 show
recipes/linkstats 5284 0 True , linux-64, osx-64 show
recipes/lorax 5235 0 True , linux-64, osx-64 show
recipes/porechop_abi 4990 0 True osx-64 show
recipes/perl-moosex-role-withoverloading 4964 0 True osx-64 show
recipes/genclust 4874 0 True , linux-64, osx-64 show
recipes/amap 4815 0 True linux-64 show
recipes/r-zerone 4803 0 True , linux-64, osx-64 show
recipes/popgen-entropy 4776 0 True osx-64 show
recipes/bioconductor-mitoclone2 4730 0 True source download error osx-64 show
recipes/sneep 4619 0 True osx-64 show
recipes/svdss 4612 0 True linux-64 show
recipes/ripser 4542 0 True linux-64 show
recipes/aodp 4261 0 True linux-64 show
recipes/longreadsum 4246 0 True , linux-64, osx-64 show
recipes/gargammel 4175 0 True , linux-64, osx-64 show
recipes/machina 4156 0 True , linux-64, osx-64 show
recipes/relion 4145 0 True osx-64 show
recipes/metamaps 4053 0 True , linux-64, osx-64 show
recipes/bioconductor-traviz 4041 0 True linux-64 show
recipes/repdenovo 4020 0 True osx-64 show
recipes/bioconductor-benchdamic 3977 0 True dependency issue linux-64 show
recipes/bioconductor-rlseq 3916 0 True dependency issue linux-64 show
recipes/treerecs 3862 0 True linux-64 show
recipes/bamaddrg 3751 0 True linux-64 show
recipes/gargammel-slim 3604 0 True osx-64 show
recipes/pydmtools 3596 0 True , linux-64, osx-64 show
recipes/predicthaplo 3344 0 True osx-64 show
recipes/hic-straw 3265 0 True osx-64 show
recipes/leehom 3216 0 True linux-64 show
recipes/hictkpy 3115 0 True osx-64 show
recipes/cellsnake 3056 0 True linux-64 show
recipes/r-recetox-xmsannotator 3045 0 True linux-64 show
recipes/chap 2994 0 True linux-64 show
recipes/seidr 2916 0 True linux-64 show
recipes/r-netcomi 2912 0 True linux-64 show
recipes/orientagraph 2899 0 True osx-64 show
recipes/orna 2704 0 True osx-64 show
recipes/shapeit5 2690 0 True linux-64 show
recipes/bioconductor-extrachips 2553 0 True dependency issue osx-64 show
recipes/aeon 2433 0 True , linux-64, osx-64 show
recipes/naf 2407 0 True osx-64 show
recipes/snapatac2 2308 0 True disk space, linux-64, osx-64 show
recipes/bioconductor-sccomp 2248 0 True dependency issue, dependency issue linux-64, osx-64 show
recipes/merfin 2211 0 True osx-64 show
recipes/methpipe 2122 0 True osx-64 show
recipes/r-beyondcell 2044 0 True linux-64 show
recipes/pybmtools 2025 0 True , linux-64, osx-64 show
recipes/r-bayesprism 1761 0 True , linux-64, osx-64 show
recipes/hmntrimmer 1589 0 True linux-64 show
recipes/bioconductor-jaspar2022 1489 0 True compiler error linux-64 show
recipes/bioconductor-stdeconvolve 1353 0 True dependency issue linux-64 show
recipes/cagee 1347 0 True linux-64 show
recipes/plmc 1312 0 True , linux-64, osx-64 show
recipes/bioconductor-omicsviewer 1301 0 True dependency issue linux-64 show
recipes/isospecpy 1295 0 True osx-64 show
recipes/pepsirf 1274 0 True , linux-64, osx-64 show
recipes/bioconductor-scmultiome 1243 0 True dependency issue linux-64 show
recipes/symbiontscreener 1223 0 True osx-64 show
recipes/gb-io 1142 0 True osx-64 show
recipes/quickbam 1078 0 True linux-64 show
recipes/rrikindp 969 0 True osx-64 show
recipes/crussmap 968 0 True osx-64 show
recipes/mira-moods 946 0 True osx-64 show
recipes/viromeqc 821 0 True linux-64 show
recipes/bioconductor-reusedata 765 0 True linux-64 show
recipes/terrace 745 0 True , linux-64, osx-64 show
recipes/nordic 705 0 True , linux-64, osx-64 show
recipes/shortseq 485 0 True , linux-64, osx-64 show
recipes/bioconductor-lemur 455 0 True dependency issue osx-64 show
recipes/dropkick 422 0 True linux-64 show
recipes/emu-pca 363 0 True osx-64 show
recipes/mgikit 223 0 True osx-64 show
recipes/bioconductor-micsqtl 0 0 True dependency issue linux-64 show
recipes/bioconductor-gatom 0 0 True dependency issue linux-64 show
recipes/bioconductor-dreamlet 0 0 True dependency issue, dependency issue linux-64, osx-64 show
recipes/bioconductor-multirnaflow 0 0 True dependency issue linux-64 show