Run a PyStim experiment - bgur123/PyStim GitHub Wiki

• Activate your environment.

conda activate PyStim (change the name of the environment if it is not PyStim.)

• go to the PyStim folder.

cd path/PyStim (adjust this according to your path.)

• run PyStim main script (run.py).

python run.py

• It will now ask you to select the stimulus input file. Select it (example stimuli are in PyStim/stimuli). More on stimulus input files can be found in the wiki page.

• Then it will show an UI for PyStim run options. Make sure everything is correct. Check monitors and stimulus view settings wiki page for more description and explanation of these parameters.

• It should now run your stiumulus in the desired monitor. If you're doing an experiment involving NIDAQ communication, the stimulation will stop once the imaging setup stops acquiring the T-series.