Unix applied to genomic data - bcfgothenburg/VT24 GitHub Wiki

Course: VT24Unix applied to genomic data (SC00036)

Exercises for the course:

• Command line first steps
• Awk crash course
• Some basic commands
• Warm up exercises
• Basic scripting

Applications

• Identifying homologous sequences of a SARS-Cov protein
• NGS data quality
• Comparing two quantification methods
• Disease causing mutations
• Attempt of murder?

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