Minutes_MiniStd_2019 07 - airr-community/airr-standards GitHub Wiki

MiniStd Call 2019-07

Agenda

New topics

  • Restart work on the manuscript, points to discuss
    • Should the focus be shifted from the current "historical review plus scXT" to a more single-cell focused text?
    • Should -- in analogy to the MiAIRR manuscript -- we provide an implementation of the standard, in this case based on the ADC API?
    • Should we include currently ongoing efforts aiming to provide a more formalized structure for Set 5 (data processing) into the manuscript?

Follow-up

  • CAIRR in AIRR documentation

Minutes

Meta

  • Date: Fri, 2019-08-09 13:30 UTC
  • Present: Brian, Christian, Florian, Francisco, John G., Marcos, Sri

New topics

  • Discussed manuscript, re-adjusted its focus along the following lines:
    • Manuscript will be restructured to give more emphasis on single-cell applications.
    • Being able to present an implementation was an important point for the MiAIRR manuscript, therefore we should strive to also have one for the scXTs. This is currently worked on at DKFZ as an extension to the ADC API.
    • Structuring Set 5 will be a joint activity with the DataRep and Software WGs. As this is likely be a publication on its own, it will be handled separately from the current manuscript.

Follow-up

  • CAIRR in AIRR documentation: Docs have been updated to increase the visibility of CAIRR submission pipeline (#223). The question of an "airr-community.org" subdomain redirecting to CEDAR will be discussed with Comm SC.
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