Minutes_MiniStd_2019 03 - airr-community/airr-standards GitHub Wiki

Meta: 2019-03-08, 13:30 UTC

** Present ** Ahmad, Brian, Christian, Florian, Lindsay

** New Topics ** = Introduce keywords to MiAIRR = - Consensus that this is a meaningful measure to support annotation - Started a new issue on Github to collect potential terms:

https://github.com/airr-community/airr-standards/issues/185

= NULL-able MiAIRR fields = - Most MiAIRR fields are NULL-able (i.e. that there are legitimate

experimental setups in which there is no meaningful data for a field). However, are considered NOT NULL-able, basically because a data set is worthless if this information is not provided. We are now finalizing the list, which can be found in the agenda (linked above) and on Github: https://github.com/airr-community/airr-standards/issues/96#issuecomment-391165107

= Retire NCBI submission XLS = - Will update a final time when releasing MiAIRR 2.0. Will deprecate

support for the XLS 3 months later and recommend people to switch to CEDAR-based submission system. See Github #177: https://github.com/airr-community/airr-standards/issues/177

** Organization ** = AIRR2019 = - Anton Langerak (Euroclonality-NGS) accepted our invitation as

panelist for ComRepo/MiniStd/DataRep panel discussion in Genoa.

• Potential motions for AIRR Community General Assembly in May: - Transition MiniStd WG to Standing Committee (SC), time frame still open - Spin-off Ecosystems Demo/Metaanalysis activity as own WG - Spin-off Ontologies & Vocabularies as own WG - In case of an early termination of MiniStd: Spin-off single-cell data WG
• Still looking for contributions to manuscript: https://docs.google.com/document/d/1TsNYgLoRExCxu0aYu_RC7x8FbCtwqOBsRGRMj8n8vjc