HCP Pipelines

Version of Tools Used for Pipeline Runs on "Mainline" HCP Data Releases

Table of Contents

• Introduction
• Structural Preprocessing

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The data released by the Human Connectome Project HCP has been processed using the scripts in this repository. The initial set of pipelines, the Minimal PreProcessing pipelines are described in Glasser et al..

Each pipeline uses a set of tools such as the FMRIB Software Library (a.k.a. FSL) and FreeSurfer to perform its tasks. This document is intended to help in understanding and duplicating the results of these runs by providing a list of the versions of tools used for each of the pipeline runs for data released as part of the HCP Data Releases. In particular, this document covers the tools used for pipeline runs of data included in the HCP 500 Subjects and 900 Subjects Data Releases.

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The first step in processing the released data is to run the Structural Preprocessing Pipeline.

• HCP Pipeline Scripts VERsion: XX.XX
• FreeSurfer Version:
• FSL Version:

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