PAD clustering - VCCRI/PAD GitHub Wiki
Authors: Pengyi Yang, Andrew Oldfield, Taiyun Kim*, Andrian Yang*, Jean Yee Hwa Yang, Joshua W.K. Ho
* Developer of website
Contact: [email protected]
Copyright © 2017, Victor Chang Cardiac Research Institute
Synopsis
PAD clustering is a web resource to identify co-localization sites of binding sites at regions proximal and distal regions to gene promoters.
Requirements
- Python v2.7
- MySQl v5.7.10
- MySQL-python v1.2.5
- Django v1.9
- django-crispy-forms v1.6.0
- django-multiupload v0.5
- numpy v1.10.4
- plotly v1.9.5
- pybedtools v0.7.5
- bedtools v2.25.0
- scipy v0.17.0