QuNex SDK documentation

[TOC]

Background

The Quantitative Neuroimaging Environment & ToolboX (QuNex) integrates code developed in several programming languages that support a flexible and extensible framework for data organization, preprocessing, quality assurance and various analyses across neuroimaging modalities. The QuNex suite is flexible and can be updated by adding specific functions and units of code to support new command calls developed around its component tools.

QuNex SDK is a separate set of tools provided as a Git repository created to support the development and acceptance testing procedures for core QuNex developers as well as others who wish to contribute to the development of the QuNex suite.

QuNex suite and its SDK are developed and maintained by the:

• Cho Lab, Yale University
• Mind and Brain Lab, University of Ljubljana

QuNex development

Information for QuNex developers is provided in the following sections:

• Development information General information for the development process.

• DevOps model Overview of the DevOps model and strategy for developers of the QuNex suite.

• Development workflow Instructions on how to setup and use a development environment.

• How to write commit messages Information on how to write commit messages.

• QuNex container development Guide on QuNex container development, building and tagging.

• Read the Docs documentation deployment Guide on how to compile the Read the Docs documentation.

• Writing QuNex tutorials Template on how to write QuNex tutorials.

• Configure rclone Configure rclone for QuNex data sharing.

• Sharepoint data sharing Instructions for sharing data using the Qunex Sharepoint site.

QuNex support servers

Information about deploying servers to support QuNex infrastructure:

• Discourse server deployment

• Development server deployment