SGA - The-Bioinformatics-Group/Albiorix GitHub Wiki

Commands(s):

  • sga
  • sga-astat.py
  • sga-bam2de.pl
  • sga-mergeDriver.pl

Installed in:

/usr/local/bin

Notes:

SGA - String Graph Assembler SGA is a de novo genome assembler based on the concept of string graphs. The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA sequence reads.

https://github.com/jts/sga