Requirements - StochasticAnalytics/emClarity GitHub Wiki

Table of Contents

Hardware Requirements

Must Have

12Gb > gpu

Helpful

ssd mem

Software dependencies

Linux OS

CUDA vs 7.5 or greater. For cards with Pascal architecture (Titan Xp, P100) CUDA vs 8.0 or greater is needed to take full advantage.

linked dynamically (all users)

imod

chimera

matlab MCR

linked statically (only if you comiple emClarity)

To compile emClarity you also need a binary of ctffind4 for the and per-Tilt CTF estimation. You can link your own, but I advise you use the version linked below. If linking, it should be named as follows:

Please download the following folder and eit the line in your mComiple.sh to point to this location

export emC_DEPS="/groups/grigorieff/home/himesb/work/emC_dependencies"

emC_dependences

Other

your brain fool

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