Executing a blast against its own sequences database - SouthGreenPlatform/tutorials GitHub Wiki

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Description

This page describes how blast sequences against its own sequences database.

We need, in this tutorial:

• a fasta file that contains sequences to blast
• a fasta file corresponding to the sequence database used for the nlast

Author(s)

Authors	Christine Tranchant-Dubreuil
Research Unit	UMR DIADE
Institut

Keywords

makeblastdbcmd, blastn, blastx, tblastn, tblastx

Files format

fasta

Date

10/03/2017

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Summary

• Formating sequence database

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Formating sequence database

[tranchant@master0 ~]$ blablabla