gcc - SMRUCC/GCModeller GitHub Wiki
Module AssemblyName: file:///G:/GCModeller/manual/bin/gcc.exe Root namespace: gcc.CLI
All of the command that available in this program has been list below:
| Function API | Info |
|---|---|
| -add_replacement | |
| -add_rule | |
| compile_metacyc | compile a metacyc database into a gcml(genetic clock markup language) model file. |
Prototype: gcc.CLI::Int32 AddNewPair(Microsoft.VisualBasic.CommandLine.CommandLine)
Information:
Usage: G:\GCModeller\manual\bin\gcc.exe -add_replacement -old <old_value> -new <new_value>
Example: gcc -add_replacement
Prototype: gcc.CLI::Int32 AddRule(Microsoft.VisualBasic.CommandLine.CommandLine)
Information:
Usage: G:\GCModeller\manual\bin\gcc.exe -add_rule -rulefile <path> -db <datadir> -model <path> [-grep <scriptText>]
Example: gcc -add_rule
Parameters information:
-rulefile
Description: a file contains some protein interaction rules
Example: -rulefile ""
-db
Description: original database for the target compiled model
Example: -db ""
-model
Description: Target model file for adding some new rules
Example: -model ""
[-grep]
Description: If null then the system will using the MeatCyc database unique-id parsing method as default.
Example: -grep ""
Prototype: gcc.CLI::Int32 CompileMetaCyc(Microsoft.VisualBasic.CommandLine.CommandLine)
Information: compile a metacyc database into a gcml(genetic clock markup language) model file.
Usage: G:\GCModeller\manual\bin\gcc.exe compile_metacyc -i <data_dir> -o <output_file>
Example: gcc compile_metacyc compile_metacyc -i ~/Documents/ecoli/ -o ~/Desktop/ecoli.xml
Parameters information:
-i
Description:
Example: -i ""
-o
Description:
Example: -o ""