mQTL

- Deprecated

Version: 1

Website

https://cran.r-project.org/web/packages/mQTL/index.html

Description

Metabolomic quantitative trait locus (mQTL) mapping, is a CRAN package that provides mQLT analysis for 1H NMR data. Recursive segmentwise peak alignment (RSPA) is used for peak alignment. Normalisation is performed using the QPN approach. Dimensionality reduction can be performed using SRV. QTL mapping is performed using the 'qtl' package. There is no paper available for this package. All of the functions for this package are also included in the mQTL.NMR bioconductor package, which also includes additional functionality and is written by the same authors.

Functionality

• Statistical Analysis

Instrument Data Type

• NMR/1H NMR

Approaches

Computer Skills

Advanced

Software Type

• R Package

Interface

• Command line interface

Operating System (OS)

• Unix/Linux
• Mac OS
• Windows

Language

R

Dependencies

R (≥ 2.15.0), qtl, MASS, outliers

Input Formats - Open

Text file

Input Formats - Proprietary

N/A

Published

2013

Last Updated

2013

License

GPL-2 | GPL-3

Paper

PMID