SpinAssign

Version: 1

Website

http://prime.psc.riken.jp/?action=nmr_search

Description

SpinAssign is a statistical index designed for the simultaneous annotation of many metabolites. It is a web-based application. Queried peaks are matched against a database of 1H and 13C chemical shifts and the p-values are calculated, where 1 is a 100% match. The database contains more than 1700 13C HSQC peaks, corresponding to 270 metabolites. The uniqueness (the extent to which a peak overlaps the reference chemical peak) is calculated. The annotation results are linked to KEGG.

Functionality

• Annotation/NMR

Instrument Data Type

• NMR/2D 1H, 13C-HSQC NMR
• NMR/1D NMR

Approaches

Computer Skills

Basic

Software Type

Web Based

Interface

Web User Interface

Operating System (OS)

• Unix/Linux
• Mac OS
• Windows

Language

Javascript, HTML, PHP, MySQL

Dependencies

N/A

Input Formats - Open

List of peaks

Input Formats - Proprietary

N/A

Published

2009

Last Updated

2015

License

Paper

http://www.ncbi.nlm.nih.gov/pubmed/20128615

PMID

20128615