MetStaT - RASpicer/MetabolomicsTools GitHub Wiki

MetStaT

Version: 1.0

Website

https://cran.r-project.org/web/packages/MetStaT/index.html

Description

MetStaT is a CRAN package which provides functions for statistical analysis. Methods it provides includes: ANOVA-simultaneous component analysis (ASCA), figure of merit (FoM), PCA, Goeman’s global test for metabolomic pathways (Q-stat), Penalized Jacobian method (for calculating network connections), Time-lagged correlation method and zero slopes method. It also includes centering and scaling functions.

Functionality

  • Statistical Analysis

Instrument Data Type

Approaches

Computer Skills

Advanced

Software Type

R Package

Interface

Command line interface

Operating System (OS)

  • Unix/Linux
  • Mac OS
  • Windows

Language

R

Dependencies

MASS, abind, pls

Input Formats - Open

matrix

Input Formats - Proprietary

N/A

Published

2013

Last Updated

2013

License

Apache License 2.0

Paper

PMID