MET-XAlign

Version: Beta

Website

http://bioinfo.noble.org/manuscript-support/met-xalign/

Description

MET-XAlign works alongside MET-COFEA. It is aimed that MET-COFEA will produce an annotated list of metabolites (characterised by neutral molecular mass and estimated retention time). MET-XAlign will then align compounds across different experimental conditions, if the neutral molecular mass and estimated retention time fall within an acceptable tolerance window. There are two alignment strategies: fast and deep. MET-COFEA parameters are configured differently for different experimental conditions to optimise metabolite alignment across samples from different experiments using MET-XAlign.

Functionality

• Preprocessing

Instrument Data Type

• MS/LC-MS

Approaches

• Untargeted

Computer Skills

Medium

Software Type

Package

Interface

Graphical user interface

Operating System (OS)

Windows

Language

C++, .NET

Dependencies

MET-COFEA

Input Formats - Open

MET-COFEA output

Input Formats - Proprietary

N/A

Published

2015

Last Updated

2015

License

Paper

http://www.ncbi.nlm.nih.gov/pubmed/26247233

PMID

26247233