AMDORAP

Version: 1.0.6

Website

http://amdorap.sourceforge.net/

Description

Accurate m/z detection method for LC-orbitrap (AMDORAP) provides preprocessing of MS data consisting of 3 stages: collect all data points with intensities above a threshold value, group them by m/z values and estimate representative m/z values for the clusters and extract EICs.

Functionality

• Preprocessing

Instrument Data Type

• MS/LC-MS/Orbitrap LC-MS

Approaches

• Untargeted

Computer Skills

Advanced

Software Type

R Package

Interface

Command line interface

Operating System (OS)

• Unix/Linux
• Mac OS
• Windows

Language

R

Dependencies

xcms, mzR, Rcpp, BiocGenerics, Biobase

Input Formats - Open

mzXML, netCDF

Input Formats - Proprietary

N/A

Published

2011

Last Updated

2012

License

GPL-2

Paper

http://www.ncbi.nlm.nih.gov/pubmed/21702951

PMID

21702951