CRF for Base Modification - PacificBiosciences/DevNet GitHub Wiki

Data for the paper, Schadt et al., Modeling Kinetic Rate Variation in Third Generation DNA Sequencing Data to Detect Putative Modifications to DNA Bases Genome Res. 2012

Data files from SMRT® Analysis v1.3.3 data.

• pRRS EcoDKAM 41 WGA Alignment HDF 393 MB
• pRRS EcoDKAM 41 Native Alignment HDF 370 MB
• pRRS EcoDKAM 41 FASTA 3.6 KB
• mtDNA WGA Alignment HDF 3.5 GB
• mtDNA Native Alignment HDF 326 MB
• mtDNA FASTA 16 KB
• M Sau3AI Native Alignment HDF 256 MB
• M Sau3AI WGA Alignment HDF 271 MB
• M Sau3Al FASTA 4.0 KB
• 8oxoG Modifications CSV 7.1 MB