Home - PGB-LIV/jmzquantml GitHub Wiki

###General

Welcome to the jmzquantml wiki!

The jmzquantml is a Java API for reading and writing mzQuantML file which is designed for recording quantitative proteomic data and meta-data.

You can also visit jmzquantml's webpage at http://pgb-liv.github.io/jmzquantml/.

###Examples

To help users to familiarise with the API, we have generated some example classes to illustrate the most important features. They can be found from sidebar.

###Citation The paper of jmzquantml API has been published in Proteomics. If you would like to cite jmzquantml in your paper, please use the following citation:

####Plain Qi, D., Krishna, R. and Jones, A. R. (2014), The jmzQuantML programming interface and validator for the mzQuantML data standard. Proteomics, 14: 685–688. doi: 10.1002/pmic.201300281

####Bibtex @article {QI14:PROTEOMICS, author = {Qi, Da and Krishna, Ritesh and Jones, Andrew R}, title = {The jmzQuantML programming interface and validator for the mzQuantML data standard}, journal = {PROTEOMICS}, volume = {14}, number = {6}, issn = {1615-9861}, url = {http://dx.doi.org/10.1002/pmic.201300281}, doi = {10.1002/pmic.201300281}, pages = {685--688}, keywords = {Bioinformatics, Java API, mzQuantML, Proteomics Standards Initiative, XML}, year = {2014}, }