Changelog - OpenChrom/openchrom GitHub Wiki
- Added support for Windows on ARM64. ChemClipse#3062
- Added per-wavelength nucleotide-labeled charts for electropherograms. OpenChrom#910 ChemClipse#3064
- Added NCBI taxonomy ID and GenBank accession. ChemClipse#3061 ChemClipse#3066
- Added support for BLAST matching or single percentage score metrics. ChemClipse#3067 ChemClipse#3071
- Added a TopHat baseline subtractor. ChemClipse#3065
- Added a Lower Convex Hull Baseline subtractor. ChemClipse#3077
- Added auto-detection for local BLAST databases. ChemClipse#3069
- Fixed too many results after local BLAST per volume queries. ChemClipse#3068
- Fixed chromatogram colors not matching nucleobases. ChemClipse#3070
- Fixed target not updating after mass spectrum identification. ChemClipse#3075
- Fixed undo for deleting a peak from the peak list. ChemClipse#3076
- Added a connector for MabritecCentral for bacterial identification using MALDI-TOF MS. OpenChrom#905 ChemClipse#3049
- Added a numeric taxonomic ID for BLAST hit results. ChemClipse#3061
- Added Entrez based queries to filter web BLAST results. ChemClipse#3059
- Added megablast as the new default algorithm for DNA alignment. ChemClipse#3054
- Added the BLAST executable and database paths to system preferences. ChemClipse#3051
- Added a simple peak picker for MALDI-TOF MS. ChemClipse#3048
- Added configurable MALDI-TOF MS chart compression. ChemClipse#3047
- Added MALDI-TOF MS noise estimation: median and LOESS smoothing. ChemClipse#3046
- Fixed large local BLAST database queries consuming a lot of RAM. ChemClipse#3056
- Fixed performance with multiple/large
.gaml,.mzData,.mzXML,.mzMLfiles in Data Explorer. OpenChrom#903, ChemClipse#3053 - Fixed indexed mzML without TIC being displayed as empty chromatograms. ChemClipse#3055
- Fixed a crash when reading BLAST XML v1. ChemClipse#3050
- Display a better error message when plug-in installation fails. OpenChrom#894
- Harden XML-based converters against external document embedding. OpenChrom#895 ChemClipse#3034
- Harden Data Explorer against
.zipfiles with relative paths. ChemClipse#3035 - Fixed a crash in mzML parsing. ChemClipse#3042
- Fixed a crash in mzXML parsing and read operator. ChemClipse#3041
- Fixed combo and spinner widgets being to high. ChemClipse#3040
- Fixed column indices not updating when clicking a target. ChemClipse#3039
- Added MS Numpress compression for mzML. ChemClipse#3037
- Added formula, SMILES, InChI and reference for duplicate detection ChemClipse#3033
- Added a dialog to remove invalid CAS from mass spectral libraries. ChemClipse#3032
- Removed several MS preferences that are no longer relevant. ChemClipse#3036
- Use generic IMarkedTraces now. OpenChrom#893
- Annotate the default time zone OpenChrom#892
- Update NetCDF to 5.10.0 OpenChrom#891
- Test CDF metadata OpenChrom#890
- Fix volatile application name OpenChrom#889
- Update the library entries by importing data from an Excel sheet. ChemClipse#3031
- Additionally allow to add a penalty if the reference value is zero. ChemClipse#3030
- Remove PartListenerAdapter ChemClipse#3029
- Remove ChromatogramEditor3x as it is not needed any longer. ChemClipse#3028
- Some warning fixes ChemClipse#3027
- Improve database entries merge support and move this to model bundle. ChemClipse#3026
- Remove unnecessary org.eclipse.ui dependencies ChemClipse#3025
- Update eclipse-jarsigner-plugin to 1.5.7 ChemClipse#3024
- Use generic MarkedTraces instead of MarkedIons or MarkedWavelengths. ChemClipse#3023
- Add an option to remove invalid CAS number from the library entries. ChemClipse#3022
- Additionally check if the database converter supports import/export. ChemClipse#3021
- Fix remove empty scans deleting the whole chromatogram when dealing with scan proxies ChemClipse#3020
- Added cleaner MALDI-TOF MS axis labels. SWTChart#601 ChemClipse#3019
- Added F5 as a hotkey to refresh Data Explorer. ChemClipse#3012
- Fixed a crash when S/N was missing from an mMass
.msdfile. ChemClipse#3018 - Fixed target markers missing when a peak was cut on top. ChemClipse#3016
- Fixed a crash when data files contain XML characters displayed in UI. ChemClipse#3014
- Added initial support for HP ChemServer. OpenChrom#888
- Added configurable axis for GC-FID and HPLC-DAD scan chart. ChemClipse#3009
- Added key styling to HTML help. ChemClipse#3005
- Added an editor hotkey CTRL ↓/↑ for next/previous peak. ChemClipse#3004
- Added an addtional column 🚦 for match quality in peak/scan list. ChemClipse#3001
- Added configurable axis to peak charts. ChemClipse#3000
- Fixed scan chart showing too many decimal places for intensity %. ChemClipse#2967
- Added configurable axis to comparison/subtract/combined scan and scan browse. ChemClipse#2999
- Added Bruker HyStar HPLC-DAD converter for
.sqlitefiles inside.dfolders. OpenChrom#886 - Fixed a crash when two parsers conflict in file endings. ChemClipse#2996
- Fixed LC-MS and HPLC-DAD not exporting into one mzML. ChemClipse#2993
- Fixed no progress bar showing when loading scan proxies. ChemClipse#2988
- Fixed performance problems with LC-MS profile scans with many ions. ChemClipse#2985
- Added axis settings to the scan chart. ChemClipse#2967
- Added settings to the chromatogram heatmap. ChemClipse#2965
- Added multiple selections to select view. ChemClipse#2969
- Added unique names to the view selection. ChemClipse#2979
- Added minor performance improvements. ChemClipse#2973
- Added a graphical chart to the subtract mass spectrum filter settings. ChemClipse#2976
- Added modifying CAS numbers via the library editor. ChemClipse#2982
- Added a button to only show duplicates in the library editor. ChemClipse#2983
- Fixed intensity graph background color in light mode. ChemClipse#2966
- Fixed centering on retention index label. ChemClipse#2968 SWTChart#599
- Fixed mass spectra database not marked for saving after editing. ChemClipse#2970
- Fixed MS1 ions storing empty MSn ion transitions. ChemClipse#2963
- Fixed checks failing for maximum CAS number. ChemClipse#2974
- Fixed ion comparison on non-nominalized spectra. ChemClipse#2977
- Fixed duplicate preference pages in the settings button. ChemClipse#2980
- Fixed database editor still showing as to be saved after successful export and CTRL+S not working. ChemClipse#2981
- Added the Advion UV/DAD
.datximport converter. - Added option to select the position directive for identifier export. OpenChrom#874
- Added a button to manually create a new mass spectrum library entry. ChemClipse#2964
- Added support to merge selected mass spectra from the library list. ChemClipse#2962
- Added a dialog to display the mass spectrum and let the user modify it. ChemClipse#2961
- Added an option to show the flavor markers and enable to modify them. ChemClipse#2960
- Added a library editor tab item to show and edit the column indices. ChemClipse#2959
- Fixed a crash when opening a chromatogram with no explicit converter requested. ChemClipse#2958
- Removed unnecessary operating calls for performance increase. ChemClipse#2957
- Review and fix to parse column information harmonized. ChemClipse#2954
- Add total signal min/max information. ChemClipse#2953
- Merge mzML PDA and MS chromatogram readers ChemClipse#2952
- Fix Data Explorer ignoring the user selected import supplier ChemClipse#2951
- SVG Export - crop the export when series are outside the bounding box. SWTChart#598
- Fix typo in preference page and adjust menu icon package name. OpenChrom#872
- Validate new assigner references on internal standard and identifier. OpenChrom#871
- Prevent that the dialog is closed if ok is pressed in search text field. ChemClipse#2949
- Dynamically edit the ComboSettingsProperty, by default edit=false ChemClipse#2948
- Add proposals to the StringSettingsProperty to enable auto complete. ChemClipse#2947
- Add support for indexed MzML ChemClipse#2946
- Ensure that high/low pass peaks filter option '0' deletes all peaks. ChemClipse#2945
- Do not fail on password protected zips ChemClipse#2944
- Fix SWT Resource was not properly disposed exception. ChemClipse#2943
- Reset perspective on e4 model ChemClipse#2942
- Add Sample Name, Operator, Instrument and Tags as file name placeholder. ChemClipse#2941
- Document the data explorer icons ChemClipse#2940
- Fix delete targets not updating properly ChemClipse#2939
- Harmonize compression support and add experimental slicer support. SWTChart#596
- Add experimental fast Bresenham line series drawing algorithm option. SWTChart#595
- Remove not needed setText("") OpenChrom#869
- Prevent assertion problems in EditingSupport instances OpenChrom#868
- Use StandardCharsets OpenChrom#867
- Fix assertion problems in PeakStandardsAssigner/References OpenChrom#866
- Fix "Peak Detector UI [Template]" checkbox columns clicks OpenChrom#865
- Check chromatogram bounds when importing AMDIS peaks OpenChrom#864
- Remove redundant superinterfaces OpenChrom#862
- Prevent assertion problems in QuantCompoundEditingSupport ChemClipse#2937
- Fix handling the selection of clipboard columns. ChemClipse#2936
- Make Time Range toolbar visibility toggle public ChemClipse#2935
- Use JVM's [Standard]Charset instead of CharsetNIO ChemClipse#2934
- Mark duplicates by name and/or CAS# and use a specific column image. ChemClipse#2933
- Enable to edit molecular weight, exact mass ... and validate CAS#. ChemClipse#2932
- Strengthen TraceRange*EditingSupport ChemClipse#2931
- Show a dialog to edit the mass spectrum library entries. ChemClipse#2930
- Simplify the mass spectrum library editor and refactor the code. ChemClipse#2929
- Make PeakScanListEditingSupport not fail assertions ChemClipse#2928
- PCA improvements ChemClipse#2927
- Do not include org.eclipse.osgi.services ChemClipse#2926
- Fix PCA cosimilarity filter table update for windows ChemClipse#2925
- Bugfixes PCA ChemClipse#2924
- Remove unused parameters ChemClipse#2923
- More missing Override annotations ChemClipse#2922
- Add missing Override annotations ChemClipse#2921
- Totally disable error log window focussing on new event ChemClipse#2920
- Disable error log window focussing on new event ChemClipse#2919
- Fix crashes in axis markers when bounds are null SWTChart#593
- Avoid dependencies in features SWTChart#592
- Fix axis tick crashing without bounds SWTChart#591
- Added AMDIS (embedded) OpenChrom#849
- Added cancellation to plugin installer. OpenChrom#853
- Added Thermo Chromeleon
*.cmbxplugin. OpenChrom#854 - Added MassLynx HPLC-DAD
*.datplugin. OpenChrom#855 - Added column default option when running a RI search. ChemClipse#2915
- Added Targets table column show/hide options. ChemClipse#2912
- Fixed file container in Data Explorer. ChemClipse#2917
- Fixed data unloading in Comparison Scan. ChemClipse#2916
- Get multiple deconvolution services OpenChrom#845
- Switch to a faster CDN for Eclipse downloads OpenChrom#844
- PGP sign product repository too OpenChrom#839
- Update pdfbox to 3.0.7 OpenChrom#838
- Various javadoc fixes ChemClipse#2907
- Add a service to resolve database UUIDs ChemClipse#2905
- Set the import/export converter to optional in the extension point. ChemClipse#2904
- Fix ArrayIndexOutOfBoundsException in peak penalty chart. ChemClipse#2903
- Feature, Save and Load PCA Evaluation ChemClipse#2902
- Migrate pdfbox to 3.0.7 ChemClipse#2901
- Remove macOS dark mode detection workaround ChemClipse#2900
- PCA, implement punishment factors for Cosine Similarity Filter ChemClipse#2899
- Add template detector support for auto adjust ranges and criteria. OpenChrom#836
- Add static method to get all available AnalysisSegmentServices OpenChrom#835
- Remove vectorgraphics bundle as it has been migrated to SWTChart OpenChrom#834
- Add a name replacer to swap names and a specific synonyms in targets. OpenChrom#833
- Streamline the integration tests OpenChrom#832
- Add licensefeature to features that miss it OpenChrom#830
- Add chemclipse pgp to trusted keys OpenChrom#829
- PCA, new NAN value replacer: 0.5 * min of current Variable ChemClipse#2898
- Add an option to mirror a given mass spectrum. ChemClipse#2897
- PCA, fix sequence of preprocessing steps ChemClipse#2896
- PCA, Change Long File Format Filter to Cosine Similarity ChemClipse#2895
- Stop exporting empty package ChemClipse#2894
- Use the first time range if the current is none and next is selected. ChemClipse#2893
- Remove test path helper ChemClipse#2892
- Expose the derive missing indices functionality to enable re-use. ChemClipse#2891
- PCA, added OPLS Regression algorithm ChemClipse#2890
- Add license to nmrml feature ChemClipse#2889
- Fix NPE if the molecule structure is null for some reasons. ChemClipse#2888
- Fix the column index part not updating ChemClipse#2887
- Improve search as you type results for manual targets ChemClipse#2886
- Fix quick access process methods not asking for resume/profile ChemClipse#2885
- Remove needless e4 injections ChemClipse#2884
- Trim the execution time of the backfolding test ChemClipse#2882
- Use EasyMock from Orbit ChemClipse#2881
- PCA, S-Plot for OPLS-DA p/p(corr) ChemClipse#2880
- PCA, fix broken filter on feature list, highlighted features ChemClipse#2879
- Remove useless SWT widgets setText("") calls SWTChart#585
- Stop using custom Point value class SWTChart#584
- Improve Colors handling SWTChart#583
- Page size options and chart settings need to be accessible from outside SWTChart#582
- Replace chart export to vector graphics with OpenChrom implementation SWTChart#581
- Various fixes to export examples and code SWTChart#576
- Add Axcend *.axr converter OpenChrom#827
- Implement in-place update OpenChrom#826
- Add reader for TOFWERK ecTOF *.h5 OpenChrom#825
- Add update.openchrom.net p2 repo to product file OpenChrom#824
- Update target platform to Apache HTTP components 5 ChemClipse#2878
- Use perspective localized label in Perspective switcher ChemClipse#2877
- Convert PluginStartup IStartup to e4 Addon in Application.e4xmi ChemClipse#2876
- Remove DisplayException ChemClipse#2875
- Open view using EPartService in ProcessingInfoPartSupport ChemClipse#2874
- Remove redundant parent interface ChemClipse#2873
- Move code styles and dictionary at top level ChemClipse#2870
- Take care that the Shell is not null. ChemClipse#2869
- Improve SWTEditor ChemClipse#2868
- Fix unused params in swt html editor ChemClipse#2867
- Allow cancel for chromatogram import ChemClipse#2866
- Don't disable .ocb compression by default in process methods ChemClipse#2865
- Allow 0 number of low/high pass to enable skipping the filter optionally ChemClipse#2864
- Fix screenshot on Windows ChemClipse#2863
- Stop using EnhancedCombo and EnhancedComboViewer ChemClipse#2860
- Delete also peaks that have only blank targets, seen as unidentified. ChemClipse#2859
- Add a spider and radar chart support and demo SWTChart#575
- Added a Thermo Chromeleon SFD plug-in for HPLC-DAD chromatograms. OpenChrom#823
- Added a Shimadzu GCD plug-in for GC-MS chromatograms.
- Added support for folders with databases in Peak File Identifier. ChemClipse#2858
- Added a non-lazy loading Data Explorer option. ChemClipse#2850 ChemClipse#2855
- Added pCorr matrix calculation in OPLS (for S-Plot) ChemClipse#2853
- Added confirmation button hotkey to manual peak detector and moved documentation to HTML help. ChemClipse#2844
- Fixed Delete Peaks not deleting peaks with empty targets when removing unidentified. ChemClipse#2859
- Fixed missing HTML help context. ChemClipse#2848
- Fixed Peak Traces part not unloading data on chromatogram close. ChemClipse#2846
- Fixed ⚫ black image export from charts. SWTChart#569
- Removed chromatogram editor pre-loading all
.ocmfiles. ChemClipse#2845 ChemClipse#2849 - Removed unused preference pages. OpenChrom#820
- Removed preferences with chart titles. Now handled by localization. ChemClipse#2857
- Removed AMDIS calibration auto loader by default. ChemClipse#2847 ChemClipse#2842
- Added rebindable hotkeys for
Targetslist. ChemClipse#2843 - Added more descriptive labels for
.ocm/.ocbZIP compression. ChemClipse#2840 - Added ranges to the
Ion Removersettings syntax. ChemClipse#2837 - Disabled
Activate log on new errorin Error Log by default. OpenChrom#816
- Remove EclipseSupplierFileIdentifier ChemClipse#2836
- Remove AMDIS folder process setttings OpenChrom#805
- Add a process data key to store and retrieve the combined mass spectrum ChemClipse#2835
- Reset Database Cache - create process method ChemClipse#2833
- Remove ChromatogramType EventHandler ChemClipse#2832
- PCA, refactor filter ChemClipse#2831
- Fix SGH ratio calculator in case settings are null. ChemClipse#2830
- Remove the scan cycles when running the scan density calculation. ChemClipse#2827
- Simplify and improve pref pages code ChemClipse#2824
- Remove redundant types and implements ChemClipse#2823
- Remove XPass system preferences ChemClipse#2822
- Remove Peak Detector system preferences ChemClipse#2821
- Remove unused Identifier preferences ChemClipse#2820
- Remove detector specific chromatogram filter system preferences ChemClipse#2819
- Remove Chromatogram Filter system preferences ChemClipse#2818
- Remove Baseline Detector preference category page ChemClipse#2817
- Remove Peak Integrator system settings ChemClipse#2816
- Port WNC system preferences to process settings ChemClipse#2815
- Unify PCR file name extension ChemClipse#2814
- Remove unused static methods in ChromatogramType ChemClipse#2812
- Don't round ions in NetCDF imports OpenChrom#802
- Stop the identification process when CANCEL is pressed in wizard. ChemClipse#2811
- Add the dynamic settings dialog to retrieve the identifier setting ChemClipse#2810
- Remove the no setting option method from the chromatogram identifer. ChemClipse#2809
- Don't remove file extension dots from PCR converters ChemClipse#2808
- Remove empty preference pages ChemClipse#2807
- Simplify ISupplierFileEditorSupport ChemClipse#2797
- Use ChromatogramEditorMSD partDescriptor in demo loading ChemClipse#2796
- Add reagent gas options for CI and an identifier transfer for MW. ChemClipse#2795
- Export Peak Width at 5% Height as CSV OpenChrom#799
- Calculating USP Tailing factor OpenChrom#797
- Remove Project Explorer OpenChrom#794
- Add an option to automatically calculate the best hybrid search MW. ChemClipse#2794
- Add NMR Save as ChemClipse#2793
- Fix AMDIS export paths ChemClipse#2787
- Simplify DynamicHandler classes ChemClipse#2783
- Calibration - add weighting option ChemClipse#2781
- Simplify the comparison update methods and display MS without targets. ChemClipse#2776
- InjectionException when IChromatogramSelection is null ChemClipse#2774
- Fix getting a valid shell to import the color schemes and to process. ChemClipse#2773
- Add initial support for SRM chromatograms from mzML ChemClipse#2772
- Remove not used PartSupport.get3xEditorPart ChemClipse#2771
- Fix Chromatogram Filter Subtract (UI) crashing ChemClipse#2770
- Removed the
Project Explorer. ChemClipse#2767 - Removed the need for batch jobs to create projects beforehand. ChemClipse#2766 ChemClipse#2763
- Removed the need for calibration to create projects beforehand. ChemClipse#2754
- Removed the Peak Identification Batch Editor. ChemClipse#2764
- Removed manual peak detector. ChemClipse#2756
- Removed duplication in
Area % Report. ChemClipse#2748 - Fixed
Comparison Scannot showing reference spectrum without target. ChemClipse#2776 - Fixed PCA Analysis Editor color schemes. ChemClipse#2773
- Fixed a crash in
Chromatogram Filter-Subtract (UI). ChemClipse#2770 - Fixed delete range not including the first scan when retention time was set to 0. ChemClipse#2758
- Added initial support for SRM chromatograms from mzML. ChemClipse#2772
- Added
Peak Scan Listtarget creation using clipboard. ChemClipse#2757
- Fixed a crash in reports that contain scan ranges. ChemClipse#2746
- Fixed Area % not reporting sample name when it said so. ChemClipse#2743
- Fixed performance after deleting multiple peaks in Peak/Scan list. ChemClipse#2741
- Fixed unknown marker sharing its settings with copy to clipboard. ChemClipse#2740
- Fixed file identifier always reporting zero matches in Feedback tab. ChemClipse#2738
- Added back an option to avoid 🟥 red fill of rectangular selection in charts. SWTChart#562
- Added dynamic settings to the scan identifier toolbar icons. ChemClipse#2731
- Added ☑️ settings to Data Explorer to work around performance problems with network drives. ChemClipse#2724
- Added private repositories to the plug-in installer UI. OpenChrom#789
- Fixed a crash in MALDI-ToF MS gel view. ChemClipse#2726
- Fixed drag and drop related crash on Windows. ChemClipse#2721
- Fixed themeing not loading all stylesheets. OpenChrom#787
- Added an optional file path to the CSV report. OpenChrom#782
- Added Bruker EVOQ (
*.qqq) DART import converter. - Added MALDI-ToF MS mass spectra centroidization. ChemClipse#2704
- Added a sortable
Loadings Tableper principal component. ChemClipse#2695 - Added highlights of error residuals in PCA charts. ChemClipse#2686
- Fixed scalable vector graphics being rendered too small. ChemClipse#2705
- Fixed legacy peak filter IDs not being recognized by process methods. ChemClipse#2124
- Fixed process quick access toolbar not showing plug-in contributed icons. ChemClipse#2701
- Fixed unrelated tiles being choosable on the welcome screen. ChemClipse#2690
- Fixed peaks imported from AMDIS not being marked as deconvoluted. ChemClipse#2688
- Fixed unknown marker not mentioning the correct number of peaks. ChemClipse#2689
- Fixed error messages about invalid peaks being too verbose. ChemClipse#2687
- Fixed crashes in process methods user interface. ChemClipse#2684
- Fixed a followup crash in referenced chromatogram selection. ChemClipse#2682
- Fixed a crash when
.ocmprocess methods were removed. ChemClipse#2680
- Fixed PCA error residuals chart not updating. ChemClipse#2677
- Fixed PCA filter samples in long data format import not being retained. ChemClipse#2673
- Added empty values that fall back to system settings in Peak Review UI. OpenChrom#770
- Added a reader for MicrobeMS spectra multifile MALDI-TOF data. OpenChrom#769
- Added rebindable hotkeys to the Peak/Scan List. ChemClipse#2671
- Added highlighting to the PCA Loading/Score Bar Charts. ChemClipse#2670
- Added error log to store exceptions in Data Analysis. ChemClipse#2672 ChemClipse#2676
- Added clickable entries in the Edit History to display processing parameters. ChemClipse#2668
- Added a Loading Bar Chart for PCA. ChemClipse#2669
- Removed editing in the scan table. ChemClipse#2675
- Added more effective default values for MALDI-TOF MS Savitzky-Golay smoothing. ChemClipse#2667
- Added a filter to nominalize an MSD chromatogram and its references. ChemClipse#2662
- Added possibility to overlay multiple chromatograms in
Chromatogram Peak Chart. ChemClipse#2656 - Added a label for polarity to
Scan Chart/TableandTargets. ChemClipse#2652 - Fixed highlighting routines for PCA samples. ChemClipse#2665
- Fixed PCA variable/feature highlighting. ChemClipse#2660
- Fixed PCA views hidden in the background not updating when gaining focus again. ChemClipse#2653
- Fixed a crash when analyzing segments from total scan signals. ChemClipse#2664
- Fixed
Data Explorerperformance by reducing the number of file format checks again. ChemClipse#2663 - Fixed failed peak creation logging too verbose messages. ChemClipse#2657
- Fixed reading instruments from mzML files. ChemClipse#2655
- Fixed a crash on macOS related to axis redrawing. SWTChart#551
- Fixed a black ⬛ copied image on Linux with Wayland. SWTChart#550
- Fixed misclick protection being enabled by default in the chromatogram overlay. ChemClipse#2651
- Fixed PCA score table not being sortable. ChemClipse#2650
- Fixed an out-of-bounds crash in the PCA score bar chart. ChemClipse#2649
- Fixed molecule drawing service selection not updating. ChemClipse#2646
- Fixed secondary Y axis not updating. SWTChart#548
- Added mouse selection to PCA score bar plot. ChemClipse#2648
- Added a 🟥 red background to the 🤠 lasso selection. SWTChart#549
- Added full-size range selection. SWTChart#547
- Fixed PCA data unload for labels. ChemClipse#2636
- Fixed buffered selection causing black ⬛ charts with display zoom on Windows. SWTChart#546
- Added CDK as the default molecule image renderer. OpenChrom#755 ChemClipse#2643
- Added sample highlights to PCA Score bar plot. ChemClipse#2644
- Added bar chart 📊 for PCA long format import wizard. ChemClipse#2637
- Added a PCA score bar plot. ChemClipse#2632
- Added description and classification for PCA variables. ChemClipse#2636
- Added a filter to manually assign the mass spectrometer and spectrum type. ChemClipse#2635
- Added a filter to manually assign the precursor ions. ChemClipse#2634
- Workspace and Project Explorer folders inside the user directory are not versioned anymore and moved
- from
OpenChrom/1.5.xtoOpenChrom - from
.openchrom/1.5.xto.openchrom
- from
- Security updates of dependencies as a precautionary measure:
- Woodstox OpenChrom#749
- SQLite JDBC OpenChrom#748
- Added support for HPLC-DAD
.cdfANDI/AIA files. OpenChrom#747 - Added text and group filter for long PCA file format import. ChemClipse#2622
- Added minor performance optimizations across the board. ChemClipse#2627 ChemClipse#2625 ChemClipse#2626 ChemClipse#2624
- Fixed sample name from mzML not being read when sample ID was used. ChemClipse#2618
- Fixed a crash in parsing mzML with HPLC-DAD spectra. ChemClipse#2617
see 1.5