Wound Healing Tool - MontpellierRessourcesImagerie/imagej_macros_and_scripts Wiki

The MRI Wound Healing Tool can be used to analyze scratch assays. It measures the area of a wound in a cellular tissue on a stack of images representing a time-series. An example image can be found here. An example image for the find-edges method (see below) can be found here.

Getting Started

To install the tools, save the file MRI_Wound_Healing_Tool.ijm under macros/toolsets in your ImageJ installation.

Select the MRI Wound Healing Tool toolset from the >> button of the ImageJ launcher.

Wound_Healing-Tool.png

Options

By right-clicking on the m button you can open the options dialog.

wound_healing_options.png

Hints

Results

wound-healing-res01.png wound-healing-res02.png wound-healing-res03.png

See also

Other (third party) software for scratch assay analysis

Publications using this tool

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  3. Elliott Grant Richards, 2021. The role of decay accelerating factor in the pathogenesis of endometriosis (PhD thesis). Case Western Reserve University.

  4. Bilotta, A.J. et al. (2021) Propionate Enhances Cell Speed and Persistence to Promote Intestinal Epithelial Turnover and Repair, Cellular and Molecular Gastroenterology and Hepatology, 11(4), pp. 1023–1044. doi:10.1016/j.jcmgh.2020.11.011.

  5. Machado, S. et al. (2021) Toxicity in vitro and in Zebrafish Embryonic Development of Gold Nanoparticles Biosynthesized Using Cystoseira Macroalgae Extracts, International Journal of Nanomedicine, Volume 16, pp. 5017–5036. doi:10.2147/IJN.S300674.

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  12. Erdem, Y.S. et al. (2021) An Image Segmentation Method for Wound Healing Assay Images, Natural and Applied Sciences Journal [Preprint]. doi:10.38061/idunas.853356.

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