Publications using MRI ImageJ macros - MontpellierRessourcesImagerie/imagej_macros_and_scripts GitHub Wiki
Publications using MRI-ImageJ-macros-and-scripts
If you published a work in which you used a tool written at Montpellier Ressources Imagerie and your publication is not in the list below, please contact me (volker.baecker at mri.cnrs.fr). Look here for publications using MRI Cell Image Analyzer.
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Simon, L., Constanzo, J., Terraza-Aguirre, C., Ibn Elfekih, Z., Berthelot, J., Benkhaled, B.T., Haute, T., Pednekar, K., Clark, K., Emerson, S.J., Atis, S., Benedetti, C., Langlois, S., Marquant, A., Prakash, J., Wang, A., Devoisselle, J.M., Montier, T., Djouad, F., Pouget, J.P., Lapinte, V., Morille, M., 2025. Surface modification of extracellular vesicles with polyoxazolines to enhance their plasma stability and tumor accumulation. Biomaterials 313, 122748.
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Baudouin, L., Adès, N., Kanté, K., Bachelin, C., Hmidan, H., Deboux, C., Panic, R., Ben Messaoud, R., Velut, Y., Hamada, S., Pionneau, C., Duarte, K., Poëa‐Guyon, S., Barnier, J., Nait Oumesmar, B., Bouslama‐Oueghlani, L., 2024. Antagonistic actions of PAK1 and NF2 /Merlin drive myelin membrane expansion in oligodendrocytes. Glia 72, 1518–1540.
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Widjaja, A.A., Lim, W.-W., Viswanathan, S., Chothani, S., Corden, B., Dasan, C.M., Goh, J.W.T., Lim, R., Singh, B.K., Tan, J., et al. (2024). Inhibition of IL-11 signalling extends mammalian healthspan and lifespan. Nature. 10.1038/s41586-024-07701-9.
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Mojahedi, M., Zargar Kharazi, A., and Poorazizi, E. (2024). Preparation and characterization of carboxymethyl cellulose/polyethylene glycol films containing bromelain/curcumin: In vitro evaluation of wound healing activity. Polymer Engineering & Sci 64, 1993–2005.
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Kesidou, D., Bennett, M., Monteiro, J.P., McCracken, I.R., Klimi, E., Rodor, J., Condie, A., Cowan, S., Caporali, A., Wit, J.B.M., et al. (2024). Extracellular vesicles from differentiated stem cells contain novel proangiogenic miRNAs and induce angiogenic responses at low doses. .Molecular Therapy 32, 185–203.
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Rojas, L., Tobar, N., Espinoza, J., Ríos, S., Martínez, C., Martínez, J., Graves, D.T., and Smith, P.C. (2024). FOXO1 regulates wound‐healing responses in human gingival fibroblasts. J of Periodontal Research 59, 611–621.
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Heydari, P., Zargar Kharazi, A., and Shariati, L. (2024). Enhanced wound regeneration by PGS/PLA fiber dressing containing platelet-rich plasma: an in vitro study. Sci Rep 14, 12019.
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Papadimitriou, L., Karagiannaki, A., Stratakis, E., and Ranella, A. (2024). Substrate topography affects PC12 cell differentiation through mechanotransduction mechanisms. Mechanobiology in Medicine 2, 100039. 10.1016/j.mbm.2024.100039.
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Ruta, V., Naro, C., Pieraccioli, M., Leccese, A., Archibugi, L., Cesari, E., Panzeri, V., Allgöwer, C., Arcidiacono, P.G., Falconi, M., et al. (2024). An alternative splicing signature defines the basal-like phenotype and predicts worse clinical outcome in pancreatic cancer. Cell Reports Medicine 5, 101411. 10.1016/j.xcrm.2024.101411.
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Osorio-Conles, Ó., Jiménez, A., Ibarzabal, A., Balibrea, J.M., De Hollanda, A., and Vidal, J. (2023). Limited Bariatric Surgery-induced Weight Loss in Subjects With Type 2 Diabetes: Predictor Variables in Adipose Tissue. The Journal of Clinical Endocrinology & Metabolism 108, e1205–e1213. 10.1210/clinem/dgad271.
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Serwe, G., Kachaner, D., Gagnon, J., Plutoni, C., Lajoie, D., Duramé, E., Sahmi, M., Garrido, D., Lefrançois, M., Arseneault, G., et al. (2023). CNK2 promotes cancer cell motility by mediating ARF6 activation downstream of AXL signalling. Nat Commun 14, 3560. 10.1038/s41467-023-39281-z.
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Prekovic, S., Chalkiadakis, T., Roest, M., Roden, D., Lutz, C., Schuurman, K., Opdam, M., Hoekman, L., Abbott, N., Tesselaar, T., et al. (2023). Luminal breast cancer identity is determined by loss of glucocorticoid receptor activity. EMBO Mol Med 15, e17737. 10.15252/emmm.202317737.
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Osorio-Conles, Ó., Ibarzabal, A., Balibrea, J.M., Vidal, J., Ortega, E., and De Hollanda, A. (2023). FABP4 Expression in Subcutaneous Adipose Tissue Is Independently Associated with Circulating Triglycerides in Obesity. JCM 12, 1013. 10.3390/jcm12031013.
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Grillet, P.-E., Desplanche, E., Wynands, Q., Gouzi, F., Bideaux, P., Fort, A., Scheuermann, V., Lacampagne, A., Virsolvy, A., Thireau, J., et al. (2023). Diastolic Cardiomyopathy Secondary to Experimentally Induced Exacerbated Emphysema. Am J Respir Cell Mol Biol 69, 230–241. 10.1165/rcmb.2022-0382OC.
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Li, Y., Shah, R.B., Sarti, S., Belcher, A.L., Lee, B.J., Gorbatenko, A., Nemati, F., Yu, H., Stanley, Z., Rahman, M., et al. (2023). A noncanonical IRAK4-IRAK1 pathway counters DNA damage–induced apoptosis independently of TLR/IL-1R signaling. Sci. Signal. 16, eadh3449. 10.1126/scisignal.adh3449.
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Gurri, S., Siegenthaler, B., Cangkrama, M., Restivo, G., Huber, M., Saliba, J., Dummer, R., Blank, V., Hohl, D., and Werner, S. (2023). NRF3 suppresses squamous carcinogenesis, involving the unfolded protein response regulator HSPA5. EMBO Mol Med 15, e17761. 10.15252/emmm.202317761.
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Mehak Passi (2023). CDK5 interacts with STK3- A consequence to the Hippo Signaling.
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Espinosa-Ruíz, C., and Esteban, M.Á. (2023). Modulation of cell migration and cell tracking of the gilthead seabream (Sparus aurata) SAF-1 cells by probiotics. Fish & Shellfish Immunology 142, 109149. 10.1016/j.fsi.2023.109149.
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Claude-Taupin, A., Isnard, P., Bagattin, A., Kuperwasser, N., Roccio, F., Ruscica, B., Goudin, N., Garfa-Traoré, M., Regnier, A., Turinsky, L., et al. (2023). The AMPK-Sirtuin 1-YAP axis is regulated by fluid flow intensity and controls autophagy flux in kidney epithelial cells. Nat Commun 14, 8056. 10.1038/s41467-023-43775-1.
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Matias, G.S.S., Carreira, A.C.O., Batista, V.F., Barreto, R.S.N., Miglino, M.A., and Fratini, P. (2023). Ionic Detergent Under Pressure-Vacuum as an Innovative Strategy to Generate Canine Tracheal Scaffold for Organ Engineering. Cells Tissues Organs 212, 535–545. 10.1159/000525273.
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Bidan, N., Dunsmore, G., Ugrinic, M., Bied, M., Moreira, M., Deloménie, C., Ginhoux, F., Blériot, C., De La Fuente, M., and Mura, S. (2023). Multicellular tumor spheroid model to study the multifaceted role of tumor-associated macrophages in PDAC. Drug Deliv. and Transl. Res. 10.1007/s13346-023-01479-5.
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Huang, C.-J., Pu, C.-M., Su, S.-Y., Lo, S.-L., Lee, C.H., and Yen, Y.-H. (2023). Improvement of wound healing by capsaicin through suppression of the inflammatory response and amelioration of the repair process. Mol Med Rep 28, 155. 10.3892/mmr.2023.13042.
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Kadunc Polajnar, L., Lainšček, D., Gašperšič, R., Sušjan-Leite, P., Kovačič, U., Butinar, M., Turk, B., Jerala, R., and Hafner-Bratkovič, I. (2023). Engineered combinatorial cell device for wound healing and bone regeneration. Front. Bioeng. Biotechnol. 11, 1168330. 10.3389/fbioe.2023.1168330.
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Mathai, C., Jourd’heuil, F., Pham, L.G.C., Gilliard, K., Howard, D., Balnis, J., Jaitovich, A., Chittur, S.V., Rilley, M., Peredo-Wende, R., et al. (2023). Regulation of DNA damage and transcriptional output in the vasculature through a cytoglobin-HMGB2 axis. Redox Biology 65, 102838. 10.1016/j.redox.2023.102838.
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Osorio-Conles, Ó., Olbeyra, R., Vidal, J., Ibarzabal, A., Balibrea, J.M., and De Hollanda, A. (2023). Expression of Adipose Tissue Extracellular Matrix-Related Genes Predicts Weight Loss after Bariatric Surgery. Cells 12, 1262. 10.3390/cells12091262.
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Soler-Vázquez, M.C., Romero, M.D.M., Todorcevic, M., Delgado, K., Calatayud, C., Benitez -Amaro, A., La Chica Lhoëst, M.T., Mera, P., Zagmutt, S., Bastías-Pérez, M., et al. (2023). Implantation of CPT1AM-expressing adipocytes reduces obesity and glucose intolerance in mice. Metabolic Engineering 77, 256–272. 10.1016/j.ymben.2023.04.010.
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Acosta, A.C., Joud, H., Sun, M., Avila, M.Y., Margo, C.E., and Espana, E.M. (2023). Keratocyte-Derived Myofibroblasts: Functional Differences With Their Fibroblast Precursors. Invest. Ophthalmol. Vis. Sci. 64, 9. 10.1167/iovs.64.13.9.
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Schnoell, J., Sparr, C., Al-Gboore, S., Haas, M., Brkic, F.F., Kadletz-Wanke, L., Heiduschka, G., and Jank, B.J. (2023). The ATR inhibitor berzosertib acts as a radio- and chemosensitizer in head and neck squamous cell carcinoma cell lines. Invest New Drugs 41, 842–850. 10.1007/s10637-023-01408-w.
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Vélez, E.J., Schnebert, S., Goguet, M., Balbuena-Pecino, S., Dias, K., Beauclair, L., Fontagné-Dicharry, S., Véron, V., Depincé, A., Beaumatin, F., et al. (2023). Chaperone-mediated autophagy protects against hyperglycemic stress. Autophagy, 1–17. 10.1080/15548627.2023.2267415.
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Papadaki, V., Erpapazoglou, Z., Kokkori, M., Rogalska, M.E., Potiri, M., Birladeanu, A., Tsakiri, E.N., Ashktorab, H., Smoot, D.T., Papanikolopoulou, K., et al. (2023). IQGAP1 mediates the communication between the nucleus and the mitochondria via NDUFS4 alternative splicing. NAR Cancer 5, zcad046. 10.1093/narcan/zcad046.
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Ewerling, A., Maissl, V., Wickstead, B., and May-Simera, H.L. (2023). Neofunctionalization of ciliary BBS proteins to nuclear roles is likely a frequent innovation across eukaryotes. iScience 26, 106410. 10.1016/j.isci.2023.106410.
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Messelodi, D., Strocchi, S., Bertuccio, S.N., Baden, P., Indio, V., Giorgi, F.M., Taddia, A., Serravalle, S., Valente, S., Di Fonzo, A., et al. (2023). Neuronopathic Gaucher disease models reveal defects in cell growth promoted by Hippo pathway activation. Commun Biol 6, 431. 10.1038/s42003-023-04813-2.
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Richard Kondwani Maganga, An investigation of the mechanisms underlying the developmental origins of health and disease and their impact on telomeres, University of Western Australia, Perth, 2023.
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Mehak Passi, CDK5 interacts with STK3- A consequence to the Hippo Signaling, Ludwig-Maximilians-Universität, München, 2023.
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Gordon, E.R., Wright, C.A., James, M., and Cooper, S.J. (2023). Transcriptomic and functional analysis of ANGPTL4 overexpression in pancreatic cancer nominates targets that reverse chemoresistance. BMC Cancer 23, 524. 10.1186/s12885-023-11010-1.
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Anstee, J.E., Feehan, K.T., Opzoomer, J.W., Dean, I., Muller, H.P., Bahri, M., Cheung, T.S., Liakath-Ali, K., Liu, Z., Choy, D., et al. (2023). LYVE-1+ macrophages form a collaborative CCR5-dependent perivascular niche that influences chemotherapy responses in murine breast cancer. Developmental Cell, S1534580723003040. 10.1016/j.devcel.2023.06.006.
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Ali, U., Wabitsch, M., Tews, D., and Colitti, M. (2023). Effects of allicin on human Simpson-Golabi-Behmel syndrome cells in mediating browning phenotype. Front. Endocrinol. 14, 1141303. 10.3389/fendo.2023.1141303.
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Palomäki, V.A., Lehenkari, P., Meriläinen, S., Karttunen, T.J., and Koivukangas, V. (2023). Dynamics of adipose tissue macrophage populations after gastric bypass surgery. Obesity 31, 184–191. 10.1002/oby.23602.
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Skelin, J., Đukić, A., Filić, V., Hufbauer, M., Akgül, B., Thomas, M., Banks, L., and Tomaić, V. (2023). MAML1‐induced HPV E6 oncoprotein stability is required for cellular proliferation and migration of cervical tumor‐derived cells. Journal of Medical Virology 95, e28624. 10.1002/jmv.28624.
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Krehl, K., Hahndorf, J., Stolzenburg, N., Taupitz, M., Braun, J., Sack, I., Schnorr, J., and Guo, J. (2023). Characterization of renal fibrosis in rats with chronic kidney disease by in vivo tomoelastography. NMR in Biomedicine, e5003. 10.1002/nbm.5003.
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De Lima, J.M., Macedo, C.C.S., Barbosa, G.V., Castellano, L.R.C., Hier, M.P., Alaoui-Jamali, M.A., and Da Silva, S.D. (2023). E-liquid alters oral epithelial cell function to promote epithelial to mesenchymal transition and invasiveness in preclinical oral squamous cell carcinoma. Sci Rep 13, 3330. 10.1038/s41598-023-30016-0.
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Dardis, G.J., Wang, J., Simon, J.M., Wang, G.G., and Baldwin, A.S. (2023). An EZH2-NF-κB regulatory axis drives expression of pro-oncogenic gene signatures in triple negative breast cancer. iScience 26, 107115. 10.1016/j.isci.2023.107115.
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Kruppa, P., Gohlke, S., Łapiński, K., Garcia-Carrizo, F., Soultoukis, G.A., Infanger, M., Schulz, T.J., and Ghods, M. (2023). Lipedema stage affects adipocyte hypertrophy, subcutaneous adipose tissue inflammation and interstitial fibrosis. Front. Immunol. 14, 1223264. 10.3389/fimmu.2023.1223264.
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Mayor, J., Cuesta, A., Espinosa-Ruíz, C., and Esteban, M.Á. (2023). In vitro effects of astaxanthin on bacterial and cell viability, cell migration and mitochondrial activities in four fish cell lines. Aquaculture Reports 31, 101636. 10.1016/j.aqrep.2023.101636.
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Bonnet, M., Roche, F., Fagotto-Kaufmann, C., Gazdagh, G., Truong, I., Comunale, F., Barbosa, S., Bonhomme, M., Nafati, N., Hunt, D., et al. (2023). Pathogenic TRIO variants associated with neurodevelopmental disorders perturb the molecular regulation of TRIO and axon pathfinding in vivo. Mol Psychiatry. 10.1038/s41380-023-01963-x.
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Kretschmer, M., Mamistvalov, R., Sprinzak, D., Vollmar, A.M., and Zahler, S. (2023). Matrix stiffness regulates Notch signaling activity in endothelial cells. Journal of Cell Science 136, jcs260442. 10.1242/jcs.260442.
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Rojo‐García, A.V., Vanmunster, M., Pacolet, A., and Suhr, F. (2023). Physical inactivity by tail suspension alters markers of metabolism, structure, and autophagy of the mouse heart. Physiological Reports 11. 10.14814/phy2.15574.
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Stoletov, K., Sanchez, S., Gorroño, I., Rabano, M., Vivanco, M. d. M., Kypta, R., and Lewis, J.D. (2023). Intravital imaging of Wnt/β-catenin and ATF2-dependent signalling pathways during tumour cell invasion and metastasis. Journal of Cell Science 136, jcs260285. 10.1242/jcs.260285.
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Wertheim, B. M. et al. Proline and glucose metabolic reprogramming supports vascular endothelial and medial biomass in pulmonary arterial hypertension. JCI Insight (2023) doi:10.1172/jci.insight.163932.
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Boissière‑Michot, F., Mollevi, C., Baecker, V., Crapez, E., Jacot, W., 2022. In situ hybridization for the assessment of urokinase plasminogen activator and plasminogen activator inhibitor type‑1 in formalin‑fixed paraffin‑embedded breast cancer specimens. Int J Mol Med 49, 82. https://doi.org/10.3892/ijmm.2022.5138
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Cai, W., Srivastava, P., Feng, D., Lin, Y., Vanderburg, C.R., Xu, Y., Mclean, P., Frosch, M.P., Fisher, D.E., Schwarzschild, M.A., et al. (2022). Melanocortin 1 receptor activation protects against alpha-synuclein pathologies in models of Parkinson’s disease. Mol Neurodegeneration 17, 16. 10.1186/s13024-022-00520-4.
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Solís-Fernández, G., Montero-Calle, A., Sánchez-Martínez, M., Peláez-García, A., Fernández-Aceñero, M.J., Pallarés, P., Alonso-Navarro, M., Mendiola, M., Hendrix, J., Hardisson, D., et al. (2022). Aryl-hydrocarbon receptor-interacting protein regulates tumorigenic and metastatic properties of colorectal cancer cells driving liver metastasis. Br J Cancer 126, 1604–1615. 10.1038/s41416-022-01762-1.
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Alle, Q., Le Borgne, E., Bensadoun, P., Lemey, C., Béchir, N., Gabanou, M., Estermann, F., Bertrand‐Gaday, C., Pessemesse, L., Toupet, K., et al. (2022). A single short reprogramming early in life initiates and propagates an epigenetically related mechanism improving fitness and promoting an increased healthy lifespan. Aging Cell 21. 10.1111/acel.13714.
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Abend, A., Steele, C., Schmidt, S., Frank, R., Jahnke, H.-G., and Zink, M. (2022). Neuronal and glial cell co-culture organization and impedance spectroscopy on nanocolumnar TiN films for lab-on-a-chip devices. Biomater. Sci. 10, 5719–5730. 10.1039/D2BM01066F.
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Dincã, D. M. et al. Myotonic dystrophy RNA toxicity alters morphology, adhesion and migration of mouse and human astrocytes. Nat Commun 13, 3841 (2022).
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Tsai, F.-C., Henderson, J.M., Jarin, Z., Kremneva, E., Senju, Y., Pernier, J., Mikhajlov, O., Manzi, J., Kogan, K., Le Clainche, C., et al. (2022). Activated I-BAR IRSp53 clustering controls the formation of VASP-actin–based membrane protrusions. Sci. Adv. 8, eabp8677. 10.1126/sciadv.abp8677.
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Liu, Q. et al. Hypoxia Triggers TAZ Phosphorylation in Basal A Triple Negative Breast Cancer Cells. IJMS 23, 10119 (2022).
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Miriam González González (2022). Host cell response to polymicrobial biofilms: implications in aspiration pneumonia., Jagiellonian University Krakow, Krakow
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Issa, R., Thompson, K.L., and Price, B.L. (2022). Control of Staphylococcal-mediated endogenous protease activity alters wound closure time in a complex wound model. Journal of Dermatological Science 105, 105–112. 10.1016/j.jdermsci.2022.01.005.
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García-Jiménez, I., Cervantes-Villagrana, R.D., del-Río-Robles, J.E., Castillo-Kauil, A., Beltrán-Navarro, Y.M., García-Román, J., Reyes-Cruz, G., and Vázquez-Prado, J. (2022). Gβγ mediates activation of Rho guanine nucleotide exchange factor ARHGEF17 that promotes metastatic lung cancer progression. Journal of Biological Chemistry 298, 101440. 10.1016/j.jbc.2021.101440.
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Han P, Guo T, Jayasree A, et al. Tunable Nano-engineered Anisotropic Surface for Enhanced Mechanotransduction and Soft-Tissue Integration. Nano Research, 2022, https://doi.org/10.1007/s12274-023-5379-y
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Guillon, A. et al. Host succinate inhibits influenza virus infection through succinylation and nuclear retention of the viral nucleoprotein. The EMBO Journal 41, (2022).
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Enora LE BORGNE (2022). Reprogrammation cellulaire pour améliorer la régénération tissulaire altérée dans les pathologies du vieillissement.
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Daghero, H. et al. Jejunum-derived NF-κB reporter organoids as 3D models for the study of TNF-alpha-induced inflammation. Sci Rep 12, 14425 (2022).
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Kúthy-Sutus, E., Kharrat, B., Gábor, E., Csordás, G., Sinka, R., and Honti, V. (2022). A Novel Method for Primary Blood Cell Culturing and Selection in Drosophila melanogaster. Cells 12, 24. 10.3390/cells12010024.
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Tak, Y.J., and Kang, S. (2022). The E2 ubiquitin-conjugating enzyme HIP2 is a crucial regulator of quality control against mutant SOD1 proteotoxicity. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease 1868, 166316. 10.1016/j.bbadis.2021.166316.
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Fort, L., Gama, V., and Macara, I.G. (2022). Stem cell conversion to the cardiac lineage requires nucleotide signalling from apoptosing cells. Nat Cell Biol 24, 434–447. 10.1038/s41556-022-00888-x.
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Song, B., Razavi, B. S. & Pena, R. Contrasting distribution of enzyme activities in the rhizosphere of European beech and Norway spruce. Front. Plant Sci. 13, 987112 (2022).
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Kozhukharova, I., Minkevich, N., Alekseenko, L., Domnina, A. & Lyublinskaya, O. Paracrine and Autocrine Effects of VEGF Are Enhanced in Human eMSC Spheroids. IJMS 23, 14324 (2022).
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Mondaza-Hernandez, J.L., Moura, D.S., Lopez-Alvarez, M., Sanchez-Bustos, P., Blanco-Alcaina, E., Castilla-Ramirez, C., Collini, P., Merino-Garcia, J., Zamora, J., Carrillo-Garcia, J., et al. (2022). ISG15 as a prognostic biomarker in solitary fibrous tumour. Cell. Mol. Life Sci. 79, 434. 10.1007/s00018-022-04454-4.
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Ghosh, S., Leng, W., Wilsch-Bräuninger, M., Barrera-Velázquez, M., Léopold, P., and Eaton, S. (2022). A local insulin reservoir in Drosophila alpha cell homologs ensures developmental progression under nutrient shortage. Current Biology 32, 1788-1797.e5. 10.1016/j.cub.2022.02.068.
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Chaiyadet, S., Tangkawattana, S., Smout, M.J., Ittiprasert, W., Mann, V.H., Deenonpoe, R., Arunsan, P., Loukas, A., Brindley, P.J., and Laha, T. (2022). Knockout of liver fluke granulin, Ov-grn-1, impedes malignant transformation during chronic infection with Opisthorchis viverrini. PLoS Pathog 18, e1010839. 10.1371/journal.ppat.1010839.
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Anderson, S., Prateeksha, P., and Das, H. (2022). Dental Pulp-Derived Stem Cells Reduce Inflammation, Accelerate Wound Healing and Mediate M2 Polarization of Myeloid Cells. Biomedicines 10, 1999. 10.3390/biomedicines10081999.
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Osorio-Conles, Ó., Olbeyra, R., Moizé, V., Ibarzabal, A., Giró, O., Viaplana, J., Jiménez, A., Vidal, J., and de Hollanda, A. (2022). Positive Effects of a Mediterranean Diet Supplemented with Almonds on Female Adipose Tissue Biology in Severe Obesity. Nutrients 14, 2617. https://doi.org/10.3390/nu14132617.
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Noura El Habbal (2022). Early Life Exposures and Milk Composition Affect Offspring Health. Dissertation. University of Michigan.
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Benjamin Englert (2022). The Role of Stromal Hedgehog Signaling in Intestinal Fibrosis of Mice. Universitätsmedizin Berlin.
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Laubach, K.N., Yan, W., Kong, X., Sun, W., Chen, M., Zhang, J., and Chen, X. (2022). p73α1, a p73 C-terminal isoform, regulates tumor suppression and the inflammatory response via Notch1. Proc. Natl. Acad. Sci. U.S.A. 119, e2123202119. https://doi.org/10.1073/pnas.2123202119.
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Louro, A.F., Paiva, M.A., Oliveira, M.R., Kasper, K.A., Alves, P.M., Gomes‐Alves, P., and Serra, M. (2022). Bioactivity and miRNome Profiling of Native Extracellular Vesicles in Human Induced Pluripotent Stem Cell‐Cardiomyocyte Differentiation. Advanced Science 9, 2104296. https://doi.org/10.1002/advs.202104296.
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Drljača, J., Popović, A., Bulajić, D., Stilinović, N., Vidičević Novaković, S., Sekulić, S., Milenković, I., Ninković, S., Ljubković, M., and Čapo, I. (2022). Diazepam diminishes temozolomide efficacy in the treatment of U87 glioblastoma cell line. CNS Neurosci Ther 28, 1447–1457. https://doi.org/10.1111/cns.13889.
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Balzer, M.S., Doke, T., Yang, Y.-W., Aldridge, D.L., Hu, H., Mai, H., Mukhi, D., Ma, Z., Shrestha, R., Palmer, M.B., et al. (2022). Single-cell analysis highlights differences in druggable pathways underlying adaptive or fibrotic kidney regeneration. Nat Commun 13, 4018.
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Kirstein, A. (2022). Characterization of the radiation response of Glioblastoma cells with different radiosensitivities. Dissertation. Technische Universität München.
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Korona, B., Korona, D., Zhao, W., Wotherspoon, A.C., and Du, M.-Q. (2022). CCR6 activation links innate immune responses to MALT lymphoma development. Haematol.
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Nguyen, A.V., Bagood, M.D., Wang, M., Caryotakis, S.E., Smith, G., Yee, S., Shen, H., Isseroff, R.R., and Soulika, A.M. (2022). Montelukast, an Antagonist of Cysteinyl Leukotriene Signaling, Impairs Burn Wound Healing. Plastic & Reconstructive Surgery 150, 92e–104e. 10.1097/PRS.0000000000009228.
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Yang, H., Ting, X., Geng, Y.-H., Xie, Y., Nierenberg, J.L., Huo, Y.-F., Zhou, Y.-T., Huang, Y., Yu, Y.-Q., Yu, X.-Y., et al. (2022). The risk variant rs11836367 contributes to breast cancer onset and metastasis by attenuating Wnt signaling via regulating NTN4 expression. Sci. Adv. 8, eabn3509.
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Matthew T. Sacco, Cytoplasmic N6-Methyladenosine Deposition on Hepatitis C Viral RNA, Duke University, Durham, 2022.
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Haas, M., Lenz, T., Kadletz-Wanke, L., Heiduschka, G., Jank, B.J., 2022. The radiosensitizing effect of β-Thujaplicin, a tropolone derivative inducing S-phase cell cycle arrest, in head and neck squamous cell carcinoma-derived cell lines. Invest New Drugs. https://doi.org/10.1007/s10637-022-01229-3
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Grbeša, I., Kalo, A., Belužić, R., Kovačević, L., Lepur, A., Rokić, F., Hochberg, H., Kanter, I., Simunović, V., Muńoz-Torres, P.M., et al. (2017). Mutations in S-adenosylhomocysteine hydrolase (AHCY) affect its nucleocytoplasmic distribution and capability to interact with S-adenosylhomocysteine hydrolase-like 1 protein. European Journal of Cell Biology 96, 579–590.
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Kabała-Dzik, A., Rzepecka-Stojko, A., Kubina, R., Jastrzębska-Stojko, Ż., Stojko, R., Wojtyczka, R., and Stojko, J. (2017). Migration Rate Inhibition of Breast Cancer Cells Treated by Caffeic Acid and Caffeic Acid Phenethyl Ester: An In Vitro Comparison Study. Nutrients 9, 1144.
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Morry, J., Ngamcherdtrakul, W., Gu, S., Reda, M., Castro, D.J., Sangvanich, T., Gray, J.W., and Yantasee, W. (2017). Targeted Treatment of Metastatic Breast Cancer by PLK1 siRNA Delivered by an Antioxidant Nanoparticle Platform. Molecular Cancer Therapeutics 16, 763–772.
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Juneja, M., Kobelt, D., Walther, W., Voss, C., Smith, J., Specker, E., Neuenschwander, M., Gohlke, B.-O., Dahlmann, M., Radetzki, S., et al. (2017). Statin and rottlerin small-molecule inhibitors restrict colon cancer progression and metastasis via MACC1. PLOS Biology 15, e2000784.
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Purohit, M.P., Verma, N.K., Kar, A.K., Singh, A., Ghosh, D., and Patnaik, S. (2017). Inhibition of Thioredoxin Reductase by Targeted Selenopolymeric Nanocarriers Synergizes the Therapeutic Efficacy of Doxorubicin in MCF7 Human Breast Cancer Cells. ACS Applied Materials & Interfaces 9, 36493–36512.
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Qiao, Y., Chen, J., Lim, Y.B., Finch-Edmondson, M.L., Seshachalam, V.P., Qin, L., Jiang, T., Low, B.C., Singh, H., Lim, C.T., et al. (2017). YAP Regulates Actin Dynamics through ARHGAP29 and Promotes Metastasis. Cell Reports 19, 1495–1502.
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Sahoo, S.S., Quah, M.Y., Nielsen, S., Atkins, J., Au, G.G., Cairns, M.J., Nahar, P., Lombard, J.M., and Tanwar, P.S. (2017). Inhibition of extracellular matrix mediated TGF-β signalling suppresses endometrial cancer metastasis. Oncotarget.
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Buesch, S., Schaepermeier, S., D’Souza, T., Ortmann, B., Schwartz, C., and Schroeder, J. (2017). Abstract 822: Simple and easy monitoring of tube formation and migration assays with the CytoSMART TM Live Cell Imaging System. Cancer Research 77, 822–822. See also this poster
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Ottosson, M., Jakobsson, A., and Johansson, F. (2017). Accelerated Wound Closure - Differently Organized Nanofibers Affect Cell Migration and Hence the Closure of Artificial Wounds in a Cell Based In Vitro Model. PLOS ONE 12, e0169419.
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MARY E. COLE, and SAMUEL D. STOUT, Poster: Three-dimensional Reconstruction of Vascular Pore Networks in the Human Rib from Two-dimensional Serial Sections, Ohio State University. 2017
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Liu, Z., Qiao, Q., Sun, Y., Chen, Y., Ren, B., and Liu, X. (2017). Sesamol ameliorates diet-induced obesity in C57BL/6J mice and suppresses adipogenesis in 3T3-L1 cells via regulating mitochondria-lipid metabolism. Molecular Nutrition & Food Research 61, 1600717.
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Marina Chulkina, E.S. Lebedeva, Aleksei V Pichugin, E.L. Holmuhamedov, and Ravshan Inoyatovich Ataullakhanov (2017). Regeneration-inducing tetradecapeptide tekkrretvereke activates mapk-kinase signaling in NIH/3T3 fibroblasts. Immunologiya 38, 172–179.
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Lucija Kovačević (2017). S-ADENOSYLHOMOCYSTEINE HYDROLASE DEFICIENCY: MOLECULAR MECHANISMS OF NOVEL DISORDER. University of Rijeka.
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Bouschet, T., Dubois, E., Reynès, C., Kota, S.K., Rialle, S., Maupetit-Méhouas, S., Pezet, M., Le Digarcher, A., Nidelet, S., Demolombe, V., et al. (2016). In Vitro Corticogenesis from Embryonic Stem Cells Recapitulates the In Vivo Epigenetic Control of Imprinted Gene Expression. Cereb. Cortex bhw102.
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YUTA MIZUNO, SHIGETO SENOO, SEIRYO WATANABE, YOICHI TAKENAKA, TAKURO HIRAMATSU, TSUYOSHI GOTO, TERUO KAWADA, and HIDEO MATSUDA (2016). Recognition of the cells in adipose tissue image using Deep learning. IPSJ Technical Report VOL.2016-MPS-107,NO.10. (Japanese)
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Tantale, K., Mueller, F., Kozulic-Pirher, A., Lesne, A., Victor, J.-M., Robert, M.-C., Capozi, S., Chouaib, R., Bäcker, V., Mateos-Langerak, J., et al. (2016). A single-molecule view of transcription reveals convoys of RNA polymerases and multi-scale bursting.. Nature Communications 7, 12248.
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Saleur, A., Baecker, V., Dyhrfjeld-Johnsen, J., poster: AUTOMATED CELL COUNTING IN COCHLEAR HISTOLOGICAL SAMPLES, 53. Workshop Inner Ear Biology, Montpellier, 2016
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Giorgio Caratti (2016). Modulation of Glucocorticoid Action in vivo: Role of Lipid Rafts and Clocks. University of Manchester.
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McGlashon, Jacob. Serotonin neurons maintain central mechanisms regulating metabolic homeostasis and are vital to thermogenicactivation. PhD (Doctor of Philosophy) thesis, University of Iowa, 2016.
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Alvarado-Ruiz, L., Martinez-Silva, M.G., Torres-Reyes, L.A., Pina-Sanchez, P., Ortiz-Lazareno, P., Bravo-Cuellar, A., Aguilar-Lemarroy, A., and Jave-Suarez, L.F. (2016). HOXA9 is Underexpressed in Cervical Cancer Cells and its Restoration Decreases Proliferation, Migration and Expression of Epithelial-to-Mesenchymal Transition Genes. Asian Pacific Journal of Cancer Prevention 17, 1037–1047.
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Saenz-de-Viteri, M., Fernández-Robredo, P., Hernández, M., Bezunartea, J., Reiter, N., Recalde, S., and García-Layana, A. (2016). Single- and repeated-dose toxicity study of bevacizumab, ranibizumab, and aflibercept in ARPE-19 cells under normal and oxidative stress conditions. Biochemical Pharmacology 103, 129–139.
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Yong, L.-K., Lai, S., Liang, Z., Poteet, E., Chen, F., van Buren, G., Fisher, W., Mo, Q., Chen, C., and Yao, Q. (2016). Overexpression of Semaphorin-3E enhances pancreatic cancer cell growth and associates with poor patient survival. Oncotarget 7.
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Alexandra Candib (2016). Characterization and Validation of MGMT-binding Partners Using a Proteomic-based Approach in Glioblastoma. McGill University, Montreal, Canada. McGill University.
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Elaina B. Breznau (2016). Regulation of epithelial cytokinesis and cell-cell junctions by MgcRacGAP. University of Michigan.
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Zhang, R.-Y., Yu, Z.-H., Zeng, L., Zhang, S., Bai, Y., Miao, J., Chen, L., Xie, J., and Zhang, Z.-Y. (2016). SHP2 phosphatase as a novel therapeutic target for melanoma treatment. Oncotarget.
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Walter, Thomas M. & Merish, S. (2016). In-Vitro wound healing activity of Herbal topical formulation on H9C2 Heart cells. Siddha Papers 0974-2522. 2016(1). 1-11.
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Bissonnette, L., Drissennek, L., Antoine, Y., Tiers, L., Hirtz, C., Lehmann, S., Perrochia, H., Bissonnette, F., Kadoch, I.-J., Haouzi, D., et al. (2016). Human S100A10 plays a crucial role in the acquisition of the endometrial receptivity phenotype. Cell Adhesion & Migration 10, 282–298.
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Rodriguez-Furlán, C., Miranda, G., Reggiardo, M., Hicks, G.R., and Norambuena, L. (2016). High throughput selection of novel plant growth regulators: Assessing the translatability of small bioactive molecules from Arabidopsis to crops. Plant Science 245, 50–60.
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Dalgaard, K., Landgraf, K., Heyne, S., Lempradl, A., Longinotto, J., Gossens, K., Ruf, M., Orthofer, M., Strogantsev, R., Selvaraj, M., et al. (2016). Trim28 Haploinsufficiency Triggers Bi-stable Epigenetic Obesity. Cell 164, 353–364.
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Hunter, R.L., and Agnew, A.M. (2016). Intraskeletal variation in human cortical osteocyte lacunar density: Implications for bone quality assessment. Bone Reports 5, 252–261.
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Goliwas, K.F., Marshall, L.E., Ransaw, E.L., Berry, J.L., and Frost, A.R. (2016). A recapitulative three-dimensional model of breast carcinoma requires perfusion for multi-week growth. Journal of Tissue Engineering 7.
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Ceddia, R. P. et al. The PGE 2 EP3 Receptor Regulates Diet-Induced Adiposity in Male Mice. Endocrinology 157, 220–232 (2016)
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Monteith, C.E., Brunner, M.E., Djagaeva, I., Bielecki, A.M., Deutsch, J.M., and Saxton, W.M. (2016). A Mechanism for Cytoplasmic Streaming: Kinesin-Driven Alignment of Microtubules and Fast Fluid Flows. Biophysical Journal 110, 2053–2065.
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MARCIO APARECIDO PEREIRA (2016). Tratamento com células derivadas do fígado embrionário retarda a progressão da fibrose hepática em ratos. Universidade de São Paulo.
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Dissertation zur Erlangung des Doktorgrades der Fakultät für Chemie und Pharmazie der Ludwig-Maximilians-Universität München. The Rabies Virus Phosphoprotein: Novel Targets and Functions Involved in Interferon Antagonism. Marco Wachowius (2016). Ludwig-Maximilians-University, Munich.
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Cormier, N., Yeo, A., Fiorentino, E., and Paxson, J. (2015). Optimization of the Wound Scratch Assay to Detect Changes in Murine Mesenchymal Stromal Cell Migration After Damage by Soluble Cigarette Smoke Extract. Journal of Visualized Experiments.
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Hunter, R.L. (2015). Variation in Cortical Osteocyte Lacunar Density and Distribution: Implications for Bone Quality Assessment. Dissertation. Ohio State University.
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René Boesten (2015). Functional analysis of two photosynthesis related genes (ASN2 and PAH2) in the response to high light. WAGENINGEN UNIVERSITY.
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Leach, D.A., Need, E.F., Toivanen, R., Trotta, A.P., Palenthorpe, H.M., Tamblyn, D.J., Kopsaftis, T., England, G.M., Smith, E., Drew, P.A., et al. (2015). Stromal androgen receptor regulates the composition of the microenvironment to influence prostate cancer outcome. Oncotarget 6, 16135–16150.
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Lettieri Barbato, D., Tatulli, G., Maria Cannata, S., Bernardini, S., Aquilano, K., and Ciriolo, M.R. (2015). Glutathione Decrement Drives Thermogenic Program In Adipose Cells. Scientific Reports 5.
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Li, J.J., Ferry, R.J., Diao, S., Xue, B., Bahouth, S.W., and Liao, F.-F. (2015). Nedd4 Haploinsufficient Mice Display Moderate Insulin Resistance, Enhanced Lipolysis, and Protection Against High-Fat Diet-Induced Obesity. Endocrinology 156, 1283–1291.
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Nathalia S. Laszkiewicz, Graziela G. Romagnoli, Carolina M. Gorgulho, Ethel Cesarman, Ramon Kaneno, Deilson E. Oliveira. In vitro migration and cellular invasion of human cells expressing variants of the Epstein-Barr virus LMP1 oncoprotein. In Nathália Suiti Laszkiewicz (2015). Migração e invasão celular in vitro de células humanas expressando variantes da proteína LMP1 do vírus de Epstein-Barr (EBV). Mestre em Patologia. UNIVERSIDADE ESTADUAL PAULISTA “JÚLIO DE MESQUITA FILHO.”
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Sánchez-Bailón, M.P., Calcabrini, A., Mayoral-Varo, V., Molinari, A., Wagner, K.-U., Losada, J.P., Ciordia, S., Albar, J.P., and Martín-Pérez, J. (2015). Cyr61 as mediator of Src signaling in triple negative breast cancer cells. Oncotarget 6, 13520–13538.
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Pfister, N.T., Fomin, V., Regunath, K., Zhou, J.Y., Zhou, W., Silwal-Pandit, L., Freed-Pastor, W.A., Laptenko, O., Neo, S.P., Bargonetti, J., et al. (2015). Mutant p53 cooperates with the SWI/SNF chromatin remodeling complex to regulate VEGFR2 in breast cancer cells.. Genes & Development 29, 1298–1315.
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Gutiérrez, S., Pirolles, E., Yvon, M., Baecker, V., Michalakis, Y., and Blanc, S. (2015). The Multiplicity of Cellular Infection Changes Depending on the Route of Cell Infection in a Plant Virus. Journal of Virology 89, 9665–9675.
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Celia Lopez Herrera. A novel strategy for the treatment of Obesity using the small molecule ABX300, a modulator of the LMNA gene splicing. Human health and pathology. Université Montpellier, 2015.
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Kauffman, A.S., Thackray, V.G., Ryan, G.E., Tolson, K.P., Glidewell-Kenney, C.A., Semaan, S.J., Poling, M.C., Iwata, N., Breen, K.M., Duleba, A.J., et al. (2015). A Novel Letrozole Model Recapitulates Both the Reproductive and Metabolic Phenotypes of Polycystic Ovary Syndrome in Female Mice. Biology of Reproduction 93.
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Puškaš N, Zaletel I, Stefanović BD, Ristanović D. Fractal dimension of apical dendritic arborization differs in the superficial and the deep pyramidal neurons of the rat cerebral neocortex. Neuroscience Letters. 2015 Mar;589:88–91.
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McGlashon, J.M., Gorecki, M.C., Kozlowski, A.E., Thirnbeck, C.K., Markan, K.R., Leslie, K.L., Kotas, M.E., Potthoff, M.J., Richerson, G.B., and Gillum, M.P. (2015). Central Serotonergic Neurons Activate and Recruit Thermogenic Brown and Beige Fat and Regulate Glucose and Lipid Homeostasis. Cell Metabolism 21, 692–705.
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Sushobhna Batra, Richard A. Rabin Presentation: Effects of Ethanol on Brain Injury: Role of Microglial Migration. 2015, University at Buffalo
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Mary Elizabeth Cole. A Semi-Automatic Method for Intracortical Porosity Quantification With Application to Intraskeletal Variability. Ohio State University. 2014
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Macherel D, Abdelilah BENAMAR, Pierart A, Baecker V, Avelange-Macherel M-H, Rolland A, Gaudichon S, Di Gioia L. Simple system using natural mineral water for high-throughput phenotyping of Arabidopsis thaliana seedlings in liquid culture. International Journal of High Throughput Screening 2013 Feb;1.
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