CBW IMPACTT workshop tutorials 2023 - LangilleLab/microbiome_helper GitHub Wiki

For the 2023 CBW-IMPACTT microbiome workshop, we are teaching several modules, that you can find links to below.

Before the workshop, you should have carried out the Intro to Unix tutorial.

1. Microbiome analysis using QIIME2 with 16S data
2. Microbial diversity metrics and data visualization with QIIME2 (Taught with Hena Ramay)
3. Metagenomic taxonomic and functional annotation (with Kraken2, Phyloseq, MMSeqs2 and JarrVis

Answers to questions