Default Methods Table Configuration - IntegratedBreedingPlatform/Documentation GitHub Wiki

This table shows the default configuration of the Breeding Methods table for the BMS as of December 5, 2016. Currently, the rules for generating names when advancing germplasm in nurseries and trials use the values in the separator, prefix, count, and suffix columns.

Please refer to the Process Codes Available for Use in Name Generation for details of the logic applied for each of the process codes used in these fields.

Further instructions on how to edit the Methods table to customize name generation rules can be found on Configuring the Methods Table to Customize Name Generation.

mid	mtype	mgrp	mcode	mname	mdesc	snametype	separator	prefix	count	suffix
1	GEN	G	UGM	Unknown generative method	Unknown generative method for storing historic pedigrees for self fertilizing species.	\N	\N	IB	[SEQUENCE]	\N
4	GEN	G	BDU	F1 backcross, cytoplasm unknown	Cross of F1 to recurrent parent when the direction of the cross is unknown for storing historic pedigrees.	snametype	\N	IB	[SEQUENCE]	[BC]
6	GEN	G	BRU	F2 backcross, cytoplasm unknown	Cross of F2 to recurrent parent when the direction of the cross is unknown for storinghistoric pedigrees.	\N	\N	IB	[SEQUENCE]	[BC]
8	GEN	G	CCU	Cross, cytoplasm unknown	Cross between two plants, unknown which is female	\N	\N	IB	[SEQUENCE]	\N
9	GEN	G	PCU	Population cross, cytoplasm unknown	Cross between two populations, unknown which is female	\N	\N	IB	[SEQUENCE]	\N
30	DER	G	UBM	Unknown bulking method	Seed produced by an undefined bulking operation	5	-	B	[NUMBER]	\N
31	DER	G	UDM	Unknown derivative method	Unknown derivative method in self fertilising species: for storing historic pedigrees	5	-	\N	[SEQUENCE]	\N
40	DER	G	SLF	Self and bulk	Selfing a single plant or population and bulk seed	5	-	B	[NUMBER]	\N
60	DER	G	IDN	Plant identification	Identifying and naming a plant.	5	:	\N	[SEQUENCE]	\N
61	MAN	G	NSI	Seed increase	Increase seed of a cultivar, line, population or accession.	\N	:	[SEASON]	\N	\N
62	MAN	G	ISE	Import	Import seed, clones or tissue culture of a cultivar, line, population or accession.	\N	:	[SEASON]	\N	\N
65	MAN	G	SSM	Store seed mediumterm	Store seed of a cultivar, line, population or accession in medium term storage. Some genetic drift is expected. Storage is between 0-4OC and low RH.	\N	:	[SEASON]	\N	\N
66	MAN	G	SSL	Store seed long term	Store seed of a cultivar, line, population or accession. Genetic drift is expected. Storage is about -18OC.	\N	:	[SEASON]	\N	\N
67	MAN	G	MPC	Seed increase undefined pollination	Seed increase from an unselected bulk in an undefined pollination	\N	:	[SEASON]	\N	\N
68	MAN	G	MPU	Seed increase undefined pollination unknown source	Seed increase from an unselected bulk in an undefined pollination with unknown source	\N	:	[SEASON]	\N	\N
69	MAN	G	CSE	Collected sample	Collected seed of a cultivar, population or accession.GID represents a sample collected from in situ conditions (field, market).	\N	:	[SEASON]	\N	\N
70	MAN	G	AGB1	Accession into genebank	GID represents a sample accessed into a formal genebank collection	\N	:	[SEASON]	\N	\N
71	MAN	G	AGB2	Accession into historical genebank	GID represents a sample that was accessed into a genebank that has since been closed	\N	:	[SEASON]	\N	\N
72	MAN	G	INU	Entry in international nursery	GID represents a sample that was acquired to be systematically maintained for distribution and evaluation in international nurseries	\N	:	[SEASON]	\N	\N
73	MAN	G	NNU	Entry in national nursery	GID represents a sample that was acquired to be systematically maintained for distribution and evaluation in national nurseries	\N	:	[SEASON]	\N	\N
74	MAN	G	WCO	Copy in working collection	GID represents a sample in a working collection	\N	:	[SEASON]	\N	\N
75	MAN	G	RGN	Regeneration of an accession	Sample derived by regeneration of an accession sample from a genebank	1	[FIRST]:	[SEASON]	\N	\N
76	MAN	G	SDN	Seed numbering	Numbering single seeds from a cross without generation advance	2	:	\N	[SEQUENCE]	\N
77	MAN	G	SPN	Sample numbering	Numbering samples from a germplasm strain without generation advance	5	:	\N	[SEQUENCE]	\N
101	GEN	G	C2W	Single cross	Cross between two single plants. If both parents are fixed (pure) inbred lines there will be no segregation for gametes or genotypes.	\N	\N	[CIMCRS]	[SEQUENCE]	\N
102	GEN	G	C3W	Three-way cross	Cross between two plants, one an inbred line and one a single cross (usually an F1) and thus segregating for gametes.	\N	\N	IB	[SEQUENCE]	T
103	GEN	G	CDC	Double cross	Cross between two single crosses (usually two F1s) and hence both segregating for gametes.	\N	\N	IB	[SEQUENCE]	D
104	GEN	G	CFT	Female complex top cross	Cross between a female inbred line and a three-way or more complex cross among inbred lines, thus the male is segregating for genotypes as well as gametes.	\N	\N	IB	[SEQUENCE]	\N
105	GEN	G	CMT	Male complex top cross	Cross between a male inbred line and a three-way or more complex cross among inbred lines, thus the female is segregating for genotypes as well as gametes.	\N	\N	IB	[SEQUENCE]	\N
106	GEN	G	CCX	Complex cross	Cross between two three-way or more complex crosses among pure lines, thus both sides are segregating for both gametes and genotypes. Each entity kept separate.	\N	\N	IB	[SEQUENCE]	\N
107	GEN	G	BCR	Backcross	Backcross to recover a specific gene. The coding in the genealogical table records which parent was used as the female in each cycle. Each entity kept separate.	\N	\N	IB	[SEQUENCE]	[BC]
108	GEN	G	RBC	Recessive backcross	Backcross to recover a recessive gene. As this requires a self fertilisation (derivative method) in the process. Each entity kept separate.	\N	\N	IB	[SEQUENCE]	[BC]
109	GEN	G	CIS	Interspecific cross	Cross between two species. The problem with making this a separate method is that the species cross could be made by any of the previous (101-108) or following (110-113) methods.	\N	\N	IB	[SEQUENCE]	\N
110	GEN	S	CSP	Selected pollen cross	A bulk of pollen from a selected set of males used to pollinate a female inbred line.	\N	\N	IB	[SEQUENCE]	\N
111	GEN	S	CRP	Random pollen cross	A random bulk of pollen from some population used to pollinate a female pure line. Male is then a population and will be recorded as a single entity.	\N	\N	IB	[SEQUENCE]	\N
112	GEN	S	CRM	Random mating	Open pollenation in a self fertilised species achieved through male emasculation.	\N	\N	IB	[SEQUENCE]	\N
151	GEN	S	MUN	Natural variant	A recognised naturally occurring variant in a self fertilising population.	\N	\N	IB	[SEQUENCE]	\N
152	GEN	S	MIP	Induced mutation	A population derived from inducing mutation in a inbred line.	\N	\N	IB	[SEQUENCE]	M
153	GEN	G	SCL	Somoclone	Variation induced through tissue culture of a inbred line.	\N	\N	IB	[SEQUENCE]	\N
154	GEN	G	ALP	Allo-polyploid	Polyploid formed by doubling the chromosomes of a cross between two or more species.	\N	\N	IB	[SEQUENCE]	\N
155	GEN	G	AUP	Auto-polyploid	Polyploid formed by doubling the chromosome number of a species.	\N	\N	IB	[SEQUENCE]	\N
156	GEN	S	HAP	Haploid	Individual with chromosome content of reduced gamete. Often formed by female progenitors crossed with a haploid inducer.	\N	\N	IB	[SEQUENCE]	\N
157	GEN	G	TRN	Transgenic nucleus	Individual derived from genetic transformation of the nucleus in a self fertilising species.	\N	\N	IB	[SEQUENCE]	\N
158	GEN	G	TRC	Transgenic cytoplasm	Individual derived from genetic transformation of a cytoplasm inclusion (eg chloroplast) in a self fertilising species.	\N	\N	IB	[SEQUENCE]	\N
159	GEN	S	MIX	MIXTURE SF	A mixture of lines in a self fertilizing crop	\N	\N	IB	[SEQUENCE]	\N
201	DER	G	MIL	Induced mutation line	A recognised mutation selected from an induced mutation in a line of a self fertilised species.	5	-	IM	[SEQUENCE]	\N
202	DER	G	DHL	Double haploid line	Individual produced by doubling haploid individual usually by anther culture in a self fertilised crop.	5	-	DH	[SEQUENCE]	\N
203	DER	G	DPR	Purification	Selection of one or a few plants from an inbred line or pure line cultivar.	5	\N	\N	[SEQUENCE]	\N
204	DER	G	DRU	Rouging	Eliminating off types from a inbred line or pure line cultivar.	5	-	\N	[SEQUENCE]	\N
205	DER	G	DSP	Single plant selection	Derivation through selection of a single plant, inflorescence, fruit or seed from a population	5	-	\N	[SEQUENCE]	\N
206	DER	G	DSB	Selected bulk	Derived through bulking seed from a selected set of self fertilized plants	5	-	SB	[NUMBER]	\N
207	DER	G	DRB	Random bulk selection	Derivation through bulking seed from a random selection of single plants from a self fertilising population.	5	-	RB	[NUMBER]	\N
208	DER	G	DSD	Single seed descent	Derived through the production of a single individual without selection from each individual in a segregating population.	5	-	SS	[SEQUENCE]	\N
209	DER	G	DRS	Restorer selection	Restorer Lines selected at the end of a program to back cross a gene which restores male fertility to lines carrying a Male Sterile Cytoplasm (CMS).	5	-	RST	[SEQUENCE]	\N
210	DER	S	DMS	CMS maintainer selection	Maintainer lines selected at the end of a program to back cross a gene which restores male fertility to lines carrying a Male Sterile Cytoplasm (CMS)	5	-	CMS	[SEQUENCE]	\N
211	GEN	S	CBC	CMS backcross	-	\N	\N	IB	[SEQUENCE]	\N
251	MAN	S	LPN	Landrace	Acquisition only. A Landrace Accession of a self fertilised species. This population will consist of a heterogenous mixture of homogenous genotypes.	\N	:	[SEASON]	\N	\N
252	MAN	G	ALL	Landrace line	Acquisition only. When the accession derives from a single plant in the Landrace Population.	\N	:	[SEASON]	\N	\N
253	MAN	G	ALC	Landrace cultivar	Acquisition only. A Landrace Cultivar Accession. Accession of a long term cultivar, not bred or maintained by modern breeding methods.	\N	:	[SEASON]	\N	\N
254	MAN	G	ACP	Collection population	Acquisition only. An accession of a population of a cultivated species not from farmers fields.	\N	:	[SEASON]	\N	\N
255	MAN	G	ACL	Collection line	Acquisition only. When the an accession derives from a single plant in a Collection Population.	\N	:	[SEASON]	\N	\N
256	MAN	S	AWS	Collection wild spp population	Acquisition only. An accession of a wild species population.	\N	:	[SEASON]	\N	\N
257	MAN	G	AWC	Collection wild spp line	Acquisition only. When theaccession derives from a single plant from a wild collection.	\N	:	[SEASON]	\N	\N
258	MAN	G	AWL	Collection weedy spp population	Acquisition only. An accession of which is a weed because of the result of a hybrid between the cultivated and a wild species of the crop.	\N	:	[SEASON]	\N	\N
259	MAN	G	AWD	Collection weedy spp line	Acquisition only. When the accession derives from a single plant in a collection of weedy species.	\N	:	[SEASON]	\N	\N
260	DER	S	RLN	RESELECTION	Reselection	5	-	RSL	[SEQUENCE]	\N
301	MAN	S	NSP	Seed increase plant	Seed increase from a single plant in a self fertilised species.	\N	:	[SEASON]	\N	\N
302	MAN	S	NMX	Seed increase mixture	Seed increase from a number of selected plants in a self fertilised species.	\N	:	[SEASON]	\N	\N
303	MAN	S	NBK	Seed increase bulk	Seed increase from an unselected bulk in a self fertilising species.	\N	:	[SEASON]	\N	\N
304	MAN	S	UMM	Seed increase bulk unknown source	Seed increase from an unselected bulk with unknown source	\N	:	[SEASON]	\N	\N
320	MAN	S	VPL	Pure line formation	Forming a pure line CV in a self fertilising species.	\N	:	CV	\N	\N
321	MAN	S	VHY	Hybrid formation	Forming a hybrid cultivar	\N	:	H	\N	\N
322	MAN	S	VML	Multi-line formation	Forming a multi-line CV in a self fertilising crop	\N	:	CV	\N	\N
323	MAN	G	VBS	Breeders seed	Producing Breeders Seed. Pure seed produced by breeder (usually some keptby breeder).	\N	:	[SEASON]	\N	\N
324	MAN	S	VFS	Foundation seed	Producing Foundation Seed. Pure seed derived from Breeders seed (usually kept by seed producing organisation).	\N	:	[SEASON]	\N	\N
325	MAN	G	VCS	Certified seed	Producing Certified Seed. Pure seed produced under supervision by Government Protocols.	\N	:	[SEASON]	\N	\N
326	MAN	G	VCR	Cultivar release	Release a cultivar	\N	:	CV	\N	\N
401	GEN	O	P2W	Single cross heterozygotes	Cross between two single heterozygous plants derived from an open pollenated population.	\N	\N	IB	[SEQUENCE]	\N
402	GEN	O	P3W	Three-way cross heterozygotes	Cross between a plant and a single cross of heterozygous plants from an open pollenated population.	\N	\N	IB	[SEQUENCE]	\N
403	GEN	O	PDB	Double cross pop	Cross between two single crosses among heterozygous plants from an open pollenated population.	\N	\N	IB	[SEQUENCE]	\N
404	GEN	O	PFD	Full diallel cross	Each parent mated to all others, including all reciprocals but not selfs, usually not in isolation and all full sib and reciprocal families kept separate.	\N	\N	IB	[SEQUENCE]	\N
405	GEN	O	PFB	Full diallel cross bulked	Each parent mated to all others, including all reciprocals but not selfs, usually not in isolation and all seed bulked.	\N	\N	IB	[SEQUENCE]	\N
406	GEN	O	PHD	Half diallel cross	Each parent mated to all others, no selfs and reciprocals not recorded, usually not in isolation and full sib families kept separate.	\N	\N	IB	[SEQUENCE]	\N
407	GEN	O	PHB	Half diallel cross bulked	Each parent mated to all others, no selfs and reciprocals not recorded, usually not in isolation and all seed bulked.	\N	\N	IB	[SEQUENCE]	\N
408	GEN	O	PPD	Partial diallel cross	Each parent mated to some but not all other parents in a pattern, no selfs, usually not in isolation and fullsib families kept separate.	\N	\N	IB	[SEQUENCE]	\N
409	GEN	O	PPB	Partial diallelcross bulked	Each parent mated to some but not all other parents in a pattern, no selfs, usually not in isolation and all seed bulked.	\N	\N	IB	[SEQUENCE]	\N
410	GEN	O	PSC	Subset cross	Parents dived into sets and bulked pollen from each set used to pollenate other sets, usually not in isolation. Self fertilisation avoided, all seed bulked.	\N	\N	IB	[SEQUENCE]	\N
411	GEN	O	PBC	Population backcross	Backcross to introgress a gene into a population.	\N	\N	IB	[SEQUENCE]	\N
412	GEN	O	PBR	Recessive population backcross	Backcross to introgress a recessive gene into a population.	\N	\N	IB	[SEQUENCE]	\N
414	GEN	O	PSP	Selected pollen cross pop	A bulk of stored pollen from a selected set of males used to pollinate a female population or plant.	\N	\N	IB	[SEQUENCE]	\N
415	GEN	O	PRP	Random pollen cross pop	A random bulk of stored pollen from some population used to pollinate a female population or plant.	\N	\N	IB	[SEQUENCE]	\N
416	GEN	O	TNL	Narrow based tester, line	Test (Top) cross between a known plant and a narrow based (1 or few plants) population. For practical reasons the tester population or line is used as the male which can be stored pollen.	\N	\N	IB	[SEQUENCE]	TC
417	GEN	O	TNP	Narrow based tester, pop	Test (Top) cross between a known population and a narrow based tester population.. For practical reasons the tester population or line is used as the male which can be stored pollen.	\N	\N	IB	[SEQUENCE]	TC
418	GEN	O	TBL	Broad based tester, line	Test (Top) cross between a known plant and a broad based (many plants) tester. For practical reasons the tester population is used as the male which can be stored pollen.	\N	\N	IB	[SEQUENCE]	TC
419	GEN	O	TBP	Broad based tester, pop	Test (Top) between a known population and a broad based tester. For practical reasons the tester population is used as the male which can be stored pollen.	\N	\N	IB	[SEQUENCE]	TC
420	GEN	O	POC	Polycross	Open pollination of a selected set of individuals in isolation and half-sib families kept separate.	\N	\N	IB	[SEQUENCE]	\N
421	GEN	O	PRM	Random mating pop	Open pollination of a selected set of individuals in isolation and all seed bulked.	\N	\N	IB	[SEQUENCE]	\N
422	GEN	O	PPO	Open pollination	Open pollination of an unselected set of individuals in isolation and all seed bulked.	\N	\N	IB	[SEQUENCE]	\N
423	GEN	O	PCR	Population cross	Cross between two populations.	\N	\N	IB	[SEQUENCE]	\N
424	GEN	O	PCC	Convergent cross	Series of single crosses, each cross then combined into double crosses, each of these then crossed etc.	\N	\N	IB	[SEQUENCE]	\N
425	GEN	O	PDC	Partial plus diallel cross	The full mating requires more than one year and partial and diallel crosses are combined in different years.	\N	\N	IB	[SEQUENCE]	\N
426	GEN	O	TCR	Test cross	Crosses made for generating hybrids for early generation testing. The females can be lines in any generation of inbreeding or DH lines, and the male is usually a fixed inbred line, or a F1 single cross between two fixed inbred lines.	\N	\N	IB	[SEQUENCE]	TC
451	GEN	O	OMU	Natural mutation	A recognised naturally occurring mutation from a population of heterozygous plants.	\N	\N	IB	[SEQUENCE]	\N
452	GEN	O	OMP	Induced mutation population	A population derived from inducing mutation in a population of heterozygous plants.	\N	\N	IB	[SEQUENCE]	\N
453	GEN	O	OSC	Somoclone heterozygote	Variation induced through tissue culture of heterozygous plants.	\N	\N	IB	[SEQUENCE]	\N
459	GEN	G	PPF	OPEN POLLINATION, HALF-SIB	Open-pollinated polycross seed to generate half-sib families where the female clone is know but the pollen donors are not known.	\N	\N	IB	[SEQUENCE]	\N
501	DER	O	MIS	Selection for induced mutation pop	Selection in a population for a mutation.	5	-	\N	[SEQUENCE]	\N
502	DER	O	DHP	Double haploid pop	Population produced by doubling haploid individuals.	5	-	DH	[SEQUENCE]	\N
503	DER	O	DRG	Roguing pop	Eliminating off types from a population of an open pollinated variety. Equivalent to a light mass selection.	5	-	RG	[NUMBER]	\N
504	DER	O	DSO	Single plant selection heterozygote	Selection of a single plant, inflorescence, fruit or seed from a cross fertilising population.	5	-	\N	[SEQUENCE]	\N
507	DER	O	DRP	Random bulk	Production of next generation by random mating in a population of a cross fertilizing species and bulking seed	5	-	RB	[NUMBER]	\N
508	DER	O	FMS	Full mass selection	Production of next generation by selecting before pollination, selecting on both male and female sides.	5	-	FM	[NUMBER]	\N
509	DER	O	HMS	Half mass selection	Production of next generation by selecting after pollination; selection on female side only.	5	-	HM	[NUMBER]	\N
551	MAN	O	BLP	Landrace population	Acquisition only. A Landrace Accession of a cross fertilised species. This population will consist of a heterogenous mixture of heterozygous genotypes.	\N	:	[SEASON]	\N	\N
559	DER	O	GRP	Groups	Forming a grouped population	5	-	GP	[SEQUENCE]	\N
600	DER	O	PLS	Pool	Construction of a pool in a cross fertilized species	5	-	PL	[NUMBER]	\N
601	MAN	O	MPO	Seed increase open pollination	Open pollination of an unselected set of individuals in isolation and all seed bulked. Here the aim is to maintain a population, not recombine a set of selected families.	\N	:	[SEASON]	\N	\N
603	MAN	O	MFB	Seed increase full diallel cross bulked	Each parent mated to all others, including all reciprocals but not selfs, usually not in isolation and all seed bulked. Here the aim is to maintain a population, not recombine a set of selected families.	\N	:	[SEASON]	\N	\N
605	MAN	O	MHB	Seed increase half diallel cross bulked	Each parent mated to all others, no selfs and reciprocals not recorded, usually not in isolation and all seed bulked. Here the aim is to maintain a population, not recombine a set of selected families.	\N	:	[SEASON]	\N	\N
606	MAN	O	MPB	Seed increase partial diallel cross bulked	Each parent mated to some but not all other parents in a pattern, no selfs, usually not in isolation and all seed bulked. Here the aim is to maintain a population, not recombine a set of selected families.	\N	:	[SEASON]	\N	\N
607	MAN	O	MSC	Seed increase subset cross	Parents divided into sets and bulked pollen from each set used to pollenate other sets, usually not in isolation. Self fertilisation avoided, all seed bulked. Here the aim is to maintain a population, not recombine a set of selected families.	\N	:	[SEASON]	\N	\N
622	MAN	O	WML	Synthetic formation	Forming a synthetic CV in a cross fertilising crop	\N	:	CV	\N	\N
901	MAN	C	NCI	Clone increase traditional	Propagate the clone via the normal vegetative material.	\N	:	[SEASON]	\N	\N
902	MAN	C	NCT	Clone increase tissue culture	Propagate the clone via tissueculture.	\N	:	[SEASON]	\N	\N
903	MAN	C	NCR	Clone increase regeneration	Regenerate the clone from tissue culture.	\N	:	[SEASON]	\N	\N
911	MAN	C	SCF	Clone maintained field	Clone maintained in a germplasm garden in the field in the traditional manner.	\N	:	[SEASON]	\N	\N
912	MAN	C	SCT	Clone maintained tissue culture	Clone maintained as a tissue culture.	\N	:	[SEASON]	\N	\N
921	DER	C	VCF	Clone formation	Formation of a clone as a cultivar.	5	-	\N	[SEQUENCE]	\N
922	MAN	G	SMP	SEED SAMPLE	Sample of germplasm for analysis	\N	:	[SEASON]	\N	\N
923	MAN	G	BSA	Bulk or population sample	Bulk or population sample	\N	:	[SEASON]	\N	\N
1001	MAN	S	SSN	Single seed numbering	NUMBERING SINGLE SEEDS FROM A CROSS WITHOUT GENERATION ADVANCE	\N	:	\N	[SEQUENCE]	\N
1002	GEN	G	GBM1	IBPQA-Generative Breeding Method 1	IBPQA-Generative Breeding Method 1	\N	\N	\N	\N	\N
1003	DER	G	DBM1	IBPQA-Derivative Breeding Method 1	IBPQA-Derivative Breeding Method 1	\N	\N	\N	\N	\N
1004	MAN	G	MBM1	IBPQA-Maintenance Breeding Method 1	IBPQA-Maintenance Breeding Method 1.|