Update from v1.0.0 to v1.0.1 - I2PC/scipion GitHub Wiki

From downloaded binaries

Download the Scipion v1.0.1 binaries to the same folder where you have scipion installed (not inside scipion). If your current Scipion folder is named scipion, you only need to extract the tar file there, the files will be updated and the configuration files will be kept.

$ ls -l
drwxr-xr-x 8 josem users       203 Jun 30 15:10 scipion
-rw-r--r-- 1 josem users 215550315 Jun 30 15:45 scipion_v1.0.1_2016-06-30_linux64.tgz

$ tar xvzf scipion_v1.0.1_2016-06-30_linux64.tgz

From downloaded source-code

Download the Scipion v1.0.1 source code to the same folder where you have scipion installed (not inside scipion). If your current Scipion folder is named scipion, you need to extract the tar file there, the new files will be updated and the configuration files will be kept. After that, we should recompile again.

$ ls -l
drwxr-xr-x 8 josem users       203 Jun 30 15:10 scipion
-rw-r--r-- 1 josem users  26543823 Jun 30 15:45 scipion_v1.0.1_2016-06-30_source.tgz
tar xvzf scipion_v1.0.0_150130.tgz

$ tar xvzf scipion_v1.0.1_2016-06-30_source.tgz
$ cd scipion
$ ./scipion install -j 5

From Git

If you have install Scipion using git before, just make sure you are in the master branch, update with latest changes and recompile the code.

$ cd scipion
$ git checkout master
$ git pull
$ ./scipion install -j 5
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