map_preprocessing_2 - I2PC/scipion-courses GitHub Wiki

Summary of homology modeling workflow

0.- Map preprocessing

Modeling workflow to perform the map preprocessing (location in the general workflow):

Import 3D map human Hemoglobine (step 1.a)

  1. Step 1a: Import human haemoglobin map (details in modeling tutorial and protocol appendix)

Import 3D map human haemoglobin (step 1.a)

  1. Step 2a: Mask creation method (details in modeling tutorial and protocol appendix)

Mask creation (step 2.a)

  1. Step 2b: Local MonoRes method to compute local resolution (details in modeling tutorial and protocol appendix)

Local MonoRes (step 2.b)

  1. Step 2c: Localdeblur sharpening method(details in modeling tutorial and protocol appendix)

Local MonoRes (step 2.b)

  1. Steps 2d and 4a: Extraction of the map asymmetric unit (details in modeling tutorial and protocol appendix)

Extract asymmetric unit (step 2.d)

Extract asymmetric unit (step 4.a)