chimerax_alphafold - I2PC/scipion-courses GitHub Wiki

Display the initial models produced by AlphaFold with Chimerax

Load the models with the command chimerax fold_2025_06_05_17_35_model_?.cif You may align the models using the command matchmaker #!2-5 to #1 If you want to color by plDDT (confidence by residue) color bfactor pal alpha or even more accurate color bfactor palette "0,#FF7D45:40,#FF7D45:60,#FFDB13:80,#65CBF3:100,#0053D6"