Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+10x10 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.001149
0.001189
0.0015274
0.0012160
0.0012640
0.028063
2
colMedians(X, rows, cols)
0.001316
0.001361
0.0014472
0.0013805
0.0014735
0.003297
3
colMedians(X[rows, cols])
0.001647
0.001801
0.0020915
0.0019390
0.0020350
0.009868
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.0000000
2
colMedians(X, rows, cols)
1.145344
1.144659
0.947468
1.135280
1.165744
0.1174857
3
colMedians(X[rows, cols])
1.433420
1.514718
1.369276
1.594572
1.609968
0.3516374
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on integer+10x10 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.001157
0.0011925
0.0012899
0.0012320
0.0013390
0.003571
2
rowMedians(X, cols, rows)
0.001319
0.0013680
0.0017177
0.0013925
0.0014625
0.029867
3
rowMedians(X[cols, rows])
0.001653
0.0018205
0.0020435
0.0019205
0.0020485
0.007752
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
rowMedians(X, cols, rows)
1.140017
1.147170
1.331617
1.130276
1.092233
8.363764
3
rowMedians(X[cols, rows])
1.428695
1.526625
1.584176
1.558847
1.529873
2.170821
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+10x10 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+10x10 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.149
1.1890
1.52745
1.216
1.264
28.063
2
rowMedians_X_S
1.157
1.1925
1.28992
1.232
1.339
3.571
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.0000000
1.000000
1.000000
1.0000000
2
rowMedians_X_S
1.006963
1.002944
0.8444925
1.013158
1.059335
0.1272494
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+10x10 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+100x100 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.047667
0.0489455
0.0495067
0.049259
0.0496840
0.059002
2
colMedians(X, rows, cols)
0.050012
0.0510530
0.0518520
0.051677
0.0522600
0.061308
3
colMedians(X[rows, cols])
0.056157
0.0573060
0.0585239
0.057716
0.0584625
0.107428
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
colMedians(X, rows, cols)
1.049195
1.043058
1.047375
1.049087
1.051848
1.039083
3
colMedians(X[rows, cols])
1.178111
1.170812
1.182141
1.171684
1.176687
1.820752
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on integer+100x100 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.047473
0.0489855
0.0496492
0.0493975
0.0499180
0.062526
2
rowMedians(X, cols, rows)
0.050069
0.0508580
0.0515026
0.0514535
0.0518740
0.055714
3
rowMedians(X[cols, rows])
0.055391
0.0570665
0.0583761
0.0575520
0.0580205
0.113789
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.0000000
2
rowMedians(X, cols, rows)
1.054684
1.038226
1.037330
1.041621
1.039184
0.8910533
3
rowMedians(X[cols, rows])
1.166789
1.164967
1.175771
1.165079
1.162316
1.8198669
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+100x100 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+100x100 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
47.667
48.9455
49.50669
49.2590
49.684
59.002
2
rowMedians_X_S
47.473
48.9855
49.64924
49.3975
49.918
62.526
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.0000000
1.000000
1.000000
1.000000
1.00000
1.000000
2
rowMedians_X_S
0.9959301
1.000817
1.002879
1.002812
1.00471
1.059727
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+100x100 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+1000x10 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.033378
0.0343820
0.0348537
0.0346775
0.0350340
0.044493
2
colMedians(X, rows, cols)
0.035290
0.0364185
0.0371229
0.0367450
0.0372535
0.066016
3
colMedians(X[rows, cols])
0.041412
0.0424550
0.0431284
0.0426915
0.0432365
0.055299
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
colMedians(X, rows, cols)
1.057283
1.059232
1.065107
1.059621
1.063353
1.483739
3
colMedians(X[rows, cols])
1.240698
1.234803
1.237412
1.231101
1.234130
1.242870
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on integer+1000x10 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.033378
0.0346310
0.0367103
0.0351095
0.0360145
0.078410
2
rowMedians(X, cols, rows)
0.035982
0.0370360
0.0399102
0.0375655
0.0383780
0.078175
3
rowMedians(X[cols, rows])
0.042987
0.0437935
0.0466722
0.0442830
0.0451990
0.072242
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.0000000
2
rowMedians(X, cols, rows)
1.078016
1.069446
1.087166
1.069953
1.065626
0.9970029
3
rowMedians(X[cols, rows])
1.287884
1.264575
1.271365
1.261283
1.255022
0.9213366
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+1000x10 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+1000x10 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
33.378
34.382
34.85371
34.6775
35.0340
44.493
2
rowMedians_X_S
33.378
34.631
36.71028
35.1095
36.0145
78.410
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1
1.000000
1.000000
1.000000
1.000000
1.0000
2
rowMedians_X_S
1
1.007242
1.053268
1.012458
1.027987
1.7623
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+1000x10 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+10x1000 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.036380
0.0381620
0.0396042
0.0394765
0.0408635
0.047333
2
colMedians(X, rows, cols)
0.041226
0.0434185
0.0453140
0.0444740
0.0458345
0.092878
3
colMedians(X[rows, cols])
0.045252
0.0475475
0.0488529
0.0487825
0.0501315
0.061149
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
colMedians(X, rows, cols)
1.133205
1.137742
1.144171
1.126594
1.121649
1.962225
3
colMedians(X[rows, cols])
1.243870
1.245938
1.233528
1.235735
1.226804
1.291889
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on integer+10x1000 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.036450
0.038207
0.0399224
0.039475
0.0405905
0.077928
2
rowMedians(X, cols, rows)
0.039683
0.043051
0.0440029
0.044060
0.0450445
0.048454
3
rowMedians(X[cols, rows])
0.044125
0.046707
0.0478617
0.047529
0.0486975
0.066379
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.0000000
2
rowMedians(X, cols, rows)
1.088697
1.126783
1.102209
1.116149
1.109730
0.6217791
3
rowMedians(X[cols, rows])
1.210562
1.222472
1.198867
1.204028
1.199726
0.8517991
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+10x1000 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+10x1000 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
2
rowMedians_X_S
36.45
38.207
39.92242
39.4750
40.5905
77.928
1
colMedians_X_S
36.38
38.162
39.60422
39.4765
40.8635
47.333
expr
min
lq
mean
median
uq
max
2
rowMedians_X_S
1.0000000
1.0000000
1.0000000
1.000000
1.000000
1.000000
1
colMedians_X_S
0.9980796
0.9988222
0.9920295
1.000038
1.006726
0.607394
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+10x1000 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+100x1000 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.551522
0.5533995
0.5551663
0.554339
0.5555935
0.602624
2
colMedians(X, rows, cols)
0.570874
0.5731625
0.5753260
0.574361
0.5752630
0.646639
3
colMedians(X[rows, cols])
0.624087
0.6271425
0.6285843
0.628093
0.6294730
0.651826
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
colMedians(X, rows, cols)
1.035088
1.035712
1.036313
1.036119
1.035403
1.073039
3
colMedians(X[rows, cols])
1.131572
1.133255
1.132245
1.133048
1.132974
1.081646
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on integer+100x1000 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.553368
0.5559435
0.5584355
0.5565935
0.5579010
0.621667
2
rowMedians(X, cols, rows)
0.583552
0.5858350
0.5875489
0.5866875
0.5882505
0.614171
3
rowMedians(X[cols, rows])
0.618907
0.6210605
0.6246258
0.6228175
0.6243220
0.689644
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.0000000
2
rowMedians(X, cols, rows)
1.054546
1.053767
1.052134
1.054068
1.054399
0.9879421
3
rowMedians(X[cols, rows])
1.118437
1.117129
1.118528
1.118981
1.119055
1.1093463
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+100x1000 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+100x1000 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
551.522
553.3995
555.1663
554.3390
555.5935
602.624
2
rowMedians_X_S
553.368
555.9435
558.4355
556.5935
557.9010
621.667
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.0000
2
rowMedians_X_S
1.003347
1.004597
1.005889
1.004067
1.004153
1.0316
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+100x1000 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+1000x100 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.481554
0.4828520
0.4842118
0.4836605
0.4847415
0.503828
2
colMedians(X, rows, cols)
0.495361
0.4968905
0.4980478
0.4977890
0.4988960
0.504501
3
colMedians(X[rows, cols])
0.545325
0.5473575
0.5497219
0.5482035
0.5497545
0.643403
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
colMedians(X, rows, cols)
1.028672
1.029074
1.028574
1.029212
1.029200
1.001336
3
colMedians(X[rows, cols])
1.132427
1.133593
1.135292
1.133447
1.134119
1.277029
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on integer+1000x100 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.492583
0.494789
0.4974845
0.496073
0.4982500
0.572607
2
rowMedians(X, cols, rows)
0.516114
0.518615
0.5233134
0.519426
0.5207715
0.660942
3
rowMedians(X[cols, rows])
0.563463
0.567259
0.5769345
0.569538
0.5732690
0.908084
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
rowMedians(X, cols, rows)
1.047771
1.048154
1.051919
1.047076
1.045201
1.154268
3
rowMedians(X[cols, rows])
1.143895
1.146467
1.159703
1.148093
1.150565
1.585876
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on integer+1000x100 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+1000x100 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
481.554
482.852
484.2118
483.6605
484.7415
503.828
2
rowMedians_X_S
492.583
494.789
497.4845
496.0730
498.2500
572.607
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
rowMedians_X_S
1.022903
1.024722
1.027411
1.025664
1.027867
1.136513
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on integer+1000x100 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+10x10 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.001349
0.0013760
0.0017320
0.0014090
0.0015340
0.023687
2
colMedians(X, rows, cols)
0.001511
0.0015630
0.0017252
0.0015885
0.0016965
0.006934
3
colMedians(X[rows, cols])
0.001982
0.0022165
0.0024541
0.0022980
0.0024255
0.012783
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.0000000
1.000000
1.000000
1.0000000
2
colMedians(X, rows, cols)
1.120089
1.135901
0.9960912
1.127395
1.105932
0.2927344
3
colMedians(X[rows, cols])
1.469237
1.610828
1.4169308
1.630944
1.581160
0.5396631
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on double+10x10 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.001342
0.001376
0.0015028
0.0014180
0.0015715
0.003560
2
rowMedians(X, cols, rows)
0.001485
0.001556
0.0019440
0.0015845
0.0016875
0.032230
3
rowMedians(X[cols, rows])
0.001853
0.002102
0.0022875
0.0021655
0.0023025
0.008071
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
rowMedians(X, cols, rows)
1.106557
1.130814
1.293609
1.117419
1.073815
9.053371
3
rowMedians(X[cols, rows])
1.380775
1.527616
1.522172
1.527151
1.465161
2.267135
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+10x10 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+10x10 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.349
1.376
1.73199
1.409
1.5340
23.687
2
rowMedians_X_S
1.342
1.376
1.50278
1.418
1.5715
3.560
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1
1.0000000
1.000000
1.000000
1.0000000
2
rowMedians_X_S
0.994811
1
0.8676609
1.006387
1.024446
0.1502934
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+10x10 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+100x100 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.085388
0.0860420
0.0863964
0.0862540
0.0864435
0.092971
2
colMedians(X, rows, cols)
0.087565
0.0881975
0.0887758
0.0884505
0.0887785
0.105198
3
colMedians(X[rows, cols])
0.101302
0.1019825
0.1031859
0.1022005
0.1027190
0.158396
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
colMedians(X, rows, cols)
1.025495
1.025052
1.027541
1.025465
1.027012
1.131514
3
colMedians(X[rows, cols])
1.186373
1.185264
1.194331
1.184878
1.188279
1.703714
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on double+100x100 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.085229
0.0861610
0.0870892
0.0865215
0.0869595
0.097032
2
rowMedians(X, cols, rows)
0.087775
0.0882475
0.0893708
0.0885260
0.0889975
0.108774
3
rowMedians(X[cols, rows])
0.093274
0.0938740
0.0952150
0.0942530
0.0947275
0.147012
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
rowMedians(X, cols, rows)
1.029872
1.024216
1.026198
1.023168
1.023436
1.121012
3
rowMedians(X[cols, rows])
1.094393
1.089519
1.093304
1.089359
1.089329
1.515088
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+100x100 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+100x100 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
85.388
86.042
86.39642
86.2540
86.4435
92.971
2
rowMedians_X_S
85.229
86.161
87.08921
86.5215
86.9595
97.032
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.0000000
1.000000
1.000000
1.000000
1.000000
1.00000
2
rowMedians_X_S
0.9981379
1.001383
1.008019
1.003101
1.005969
1.04368
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+100x100 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+1000x10 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.074949
0.0757145
0.0798286
0.076534
0.0783235
0.134454
2
colMedians(X, rows, cols)
0.077416
0.0781150
0.0824540
0.078691
0.0806650
0.146220
3
colMedians(X[rows, cols])
0.090740
0.0920850
0.0987415
0.092853
0.0943265
0.194842
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
colMedians(X, rows, cols)
1.032916
1.031705
1.032889
1.028184
1.029895
1.087509
3
colMedians(X[rows, cols])
1.210690
1.216214
1.236918
1.213226
1.204319
1.449135
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on double+1000x10 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.076189
0.0766055
0.0779592
0.0769240
0.0786510
0.109868
2
rowMedians(X, cols, rows)
0.078286
0.0790835
0.0802436
0.0796785
0.0811865
0.094396
3
rowMedians(X[cols, rows])
0.085653
0.0863545
0.0877400
0.0870785
0.0885220
0.097734
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.0000000
2
rowMedians(X, cols, rows)
1.027524
1.032347
1.029302
1.035808
1.032237
0.8591765
3
rowMedians(X[cols, rows])
1.124217
1.127262
1.125460
1.132007
1.125504
0.8895584
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+1000x10 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+1000x10 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
74.949
75.7145
79.82861
76.534
78.3235
134.454
2
rowMedians_X_S
76.189
76.6055
77.95923
76.924
78.6510
109.868
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.0000000
1.000000
1.000000
1.0000000
2
rowMedians_X_S
1.016545
1.011768
0.9765826
1.005096
1.004181
0.8171419
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+1000x10 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+10x1000 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.067270
0.0679735
0.0688126
0.0685890
0.069349
0.075206
2
colMedians(X, rows, cols)
0.070809
0.0722080
0.0737420
0.0731680
0.073613
0.121532
3
colMedians(X[rows, cols])
0.076863
0.0778010
0.0787147
0.0782405
0.078900
0.092896
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
colMedians(X, rows, cols)
1.052609
1.062296
1.071636
1.066760
1.061486
1.615988
3
colMedians(X[rows, cols])
1.142604
1.144578
1.143900
1.140715
1.137724
1.235221
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on double+10x1000 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.067203
0.0681190
0.0692430
0.068694
0.0694205
0.102883
2
rowMedians(X, cols, rows)
0.070095
0.0712345
0.0721646
0.072028
0.0724085
0.089288
3
rowMedians(X[cols, rows])
0.075122
0.0764265
0.0776169
0.077048
0.0773895
0.100846
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.0000000
2
rowMedians(X, cols, rows)
1.043034
1.045736
1.042193
1.048534
1.043042
0.8678596
3
rowMedians(X[cols, rows])
1.117837
1.121956
1.120934
1.121612
1.114793
0.9802008
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+10x1000 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+10x1000 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
67.270
67.9735
68.81259
68.589
69.3490
75.206
2
rowMedians_X_S
67.203
68.1190
69.24302
68.694
69.4205
102.883
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
rowMedians_X_S
0.999004
1.002141
1.006255
1.001531
1.001031
1.368016
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+10x1000 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+100x1000 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.860940
0.8627075
0.8645793
0.8634910
0.8650695
0.900853
2
colMedians(X, rows, cols)
0.883786
0.8860305
0.8922802
0.8867275
0.8880535
0.991335
3
colMedians(X[rows, cols])
1.009132
1.0115570
1.0295491
1.0128095
1.0153515
2.127851
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.00000
2
colMedians(X, rows, cols)
1.026536
1.027035
1.032040
1.026910
1.026569
1.10044
3
colMedians(X[rows, cols])
1.172128
1.172538
1.190809
1.172924
1.173723
2.36204
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on double+100x1000 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.864782
0.8669990
0.8816675
0.8679760
0.8710560
1.409143
2
rowMedians(X, cols, rows)
0.907987
0.9101955
0.9178074
0.9113740
0.9124870
1.261388
3
rowMedians(X[cols, rows])
0.937342
0.9469895
0.9573683
0.9504025
0.9558485
1.173212
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.0000000
2
rowMedians(X, cols, rows)
1.049961
1.049823
1.040990
1.049999
1.047564
0.8951455
3
rowMedians(X[cols, rows])
1.083905
1.092261
1.085861
1.094964
1.097344
0.8325713
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+100x1000 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+100x1000 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
860.940
862.7075
864.5793
863.491
865.0695
900.853
2
rowMedians_X_S
864.782
866.9990
881.6675
867.976
871.0560
1409.143
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.00000
1.000000
2
rowMedians_X_S
1.004463
1.004975
1.019765
1.005194
1.00692
1.564232
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+100x1000 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+1000x100 data. The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
0.801808
0.8047815
0.8117196
0.806619
0.8116600
0.859881
2
colMedians(X, rows, cols)
0.821630
0.8231540
0.8379777
0.824381
0.8363015
1.438840
3
colMedians(X[rows, cols])
0.874158
0.8768455
0.8973643
0.880392
0.8899950
1.278850
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.00000
1.000000
1.000000
2
colMedians(X, rows, cols)
1.024722
1.022829
1.032349
1.02202
1.030359
1.673301
3
colMedians(X[rows, cols])
1.090234
1.089545
1.105510
1.09146
1.096512
1.487241
Table: Benchmarking of rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on double+1000x100 data (transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
0.815828
0.8178225
0.8281364
0.8197490
0.831868
0.940832
2
rowMedians(X, cols, rows)
0.852303
0.8542420
0.8684241
0.8556330
0.867120
1.145397
3
rowMedians(X[cols, rows])
0.893871
0.9018045
0.9235859
0.9062475
0.917550
1.464133
expr
min
lq
mean
median
uq
max
1
rowMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
rowMedians(X, cols, rows)
1.044709
1.044532
1.048649
1.043774
1.042377
1.217430
3
rowMedians(X[cols, rows])
1.095661
1.102690
1.115258
1.105518
1.102999
1.556211
Figure: Benchmarking of colMedians_X_S(), colMedians(X, rows, cols)() and colMedians(X[rows, cols])() on double+1000x100 data as well as rowMedians_X_S(), rowMedians(X, cols, rows)() and rowMedians(X[cols, rows])() on the same data transposed. Outliers are displayed as crosses. Times are in milliseconds.
Table: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+1000x100 data (original and transposed). The top panel shows times in milliseconds and the bottom panel shows relative times.
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
801.808
804.7815
811.7196
806.619
811.660
859.881
2
rowMedians_X_S
815.828
817.8225
828.1364
819.749
831.868
940.832
expr
min
lq
mean
median
uq
max
1
colMedians_X_S
1.000000
1.000000
1.000000
1.000000
1.000000
1.000000
2
rowMedians_X_S
1.017486
1.016204
1.020225
1.016278
1.024897
1.094142
Figure: Benchmarking of colMedians_X_S() and rowMedians_X_S() on double+1000x100 data (original and transposed). Outliers are displayed as crosses. Times are in milliseconds.