The GRCh37.p13 assembly - GooglingTheCancerGenome/sv-callers GitHub Wiki
Assembly:
GRCh37.p13 (Genome Reference Consortium Human Reference 37), INSDC Assembly GCA_000001405.14, Feb 2009
- Base Pairs: 3,326,743,047
- Golden Path Length: 3,098,825,702
- Annotation method: Full genebuild
- Genebuild started: Jul 2010
- Genebuild released: Apr 2011
- Genebuild last updated/patched Sep 2013
- Database version: 99.37
- Gencode version: GENCODE 19
mtDNA:
- Molecule name: Mitochondrion MT
- GenBank ID: J01415.2
- RefSeq ID: NC_012920.1
Reconstructing UBEC "Homo_sapiens.GRCh37.GATK.illumina.fasta":
- downloading chromosome sequences for GRCh37.p13 in FASTA format from NCBI;
- renaming FASTA headers with chromosome names, as in "Homo_sapiens.GRCh37.GATK.illumina.fasta";
- adding NC_012920.1 as "MT";
- compute md5 checksum