Home - Genomics-HSE/VGsim GitHub Wiki
Welcome to the VGsim wiki.
VGsim is the software designed to simulate viral genealogies under extended SIS-model (population structure, immunity groups, non-neutral pathogen evolution etc.)
Basic tutorial: how to choose parameter values?
If you use VGsim for your research, please cite our preprint
Shchur V et al (2021) VGsim: scalable viral genealogy simulator for global pandemic. medRxiv. https://doi.org/10.1101/2021.04.21.21255891