Dependencies - GarrettJenkinson/informME GitHub Wiki

It is required to properly configure a MATLAB C++ mex compiler. For details, see:

• https://www.mathworks.com/help/matlab/ref/mex.html
• And the supported compilers column here: https://www.mathworks.com/support/requirements/previous-releases.html

A working SAMtools installation needs to be on the system path as well. The remaining dependencies (GMP, MPFR, MPREAL, and Eigen) are all C++ dependencies that the installation script will install as needed. The optional postprocessing utilities may have their own dependencies as noted in their corresponding documentation below.

NOTE: The required "mex compiler" is different from the "Matlab compiler SDK". InformME requires the former and not the latter.