Naming Conventions - GTAC-MGI/GTAC-ESP-LIMS GitHub Wiki

Git Branching

Branch naming:

• gtac/feat-###
• gtac/bugfix-###
• gtac/release-###

where ### is the number on the corresponding ticket on the kanban board.

Branch and merge new release branches off of:

• gtac/main

Branch and merge feat and bug branches off of release branches.

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ESP Protocols & Workflows

Protocols and Workflows in the ESP UI should be named in the following format:

LABNAME Lab: Protocol / Wf Name Like This

For example:

• SEQ Lab: Create Illumina Library
• RNA Lab: Process QC Data
• CLE Lab: Accession New Samples

When creating new yaml files for workflows and protocols, or exporting from the Production server, filenames should use the following format:

labname_protocol_or_wf_name_like_this_type.yml

For example:

• seq_create_illumina_library_workflow.yml
• rna_process_qc_data_protocol.yml
• cle_accession_new_samples_protocol.yml

wf.export(f"wfs/{wf.name.lower().replace(' lab:', '').replace(' ', '_')}_workflow.yml", deep=False) pt.export(f"pts/{pt.name.lower().replace(' lab:', '').replace(' ', '_')}_protocol.yml", deep=False)