Aphid experiment procedure - Cuddington-Lab/documents GitHub Wiki

Aphid Experiment Procedure

Updated January/2023

2 Weeks Prior 1 Week Prior Experiment Start
- Plant 1 tray of pea plants (one seed per pot) and place in growth chamber in the greenhouse (16:8 light:dark) - Retrieve 4 plants from the greenhouse growth chambers, place 4 aphids (mature adults without wings) on each plant

- Place plants in incubator at 20C (16:8) for 24 hours

- After 24 hours, remove adult aphids, leave nymphs to develop for 1 week.
- Collect 2 week old plants from the greenhouse (9-12 plants depending on how many incubators work)

- One round tray goes in each incubator

- Three plants per tray

- One even-aged adult aphid on each plant (from experimental prep)

Experiment Preparations

  • 2 weeks prior: Plant 1 tray of pea plants (one seed per pot) and place in growth chamber in the greenhouse

  • 1 week prior: 4 plants from the greenhouse growth chambers, 4 aphids (mature adults without wings) on each

  • Place plants in incubator 2 at 20C

  • Aphids are left on for 24 hours at which point the adults are removed and the plants are returned to the incubator for one week for the next experiment.

Experiment Start

  • Collect 2 week old plants from the greenhouse (9-12 plants depending on how many incubators work)

  • One round tray goes in each incubator

    • Three plants per tray

    • One even-aged adult aphid on each plant (from experimental prep)

  • Set up incubators

    • In Celsius:

      • Select "Settings", then "log on device" (device numbers are the same as the incubator number), then "OK" from the menu options

      • File>load tempering profile>from file>select profile>OK

      • Run>start>create log file> name file in the format as others>save

      • Check to make sure it is running, there should be a legend in the top right corner

      • Repeat steps until all incubators are set up

Experiment Completion

  • Remove trays from the incubator and count aphids on each plant

    • Record in lab notebook

    • Update spreadsheet and metafile

  • Shut down incubators

    • In Celsius:

      • Run>stop

      • File>load tempering profile>from file>select matching profile>OK

      • File>load protocol data>from file> select matching protocol> OK

      • File>save protocol data> to report>select save to excel file (make sure that all data is in the selected column)...>choose name matching protocol(remove.pro)>OK

    • Excel file should open with data

      • Confirm that temperature data was recorded
      • Add the respective excel protocol files to a new folder and name it
      • Run the cat_stats code to perform a data validation for each temperature regime
      • Update the metafile and aphid spreadsheet with the experimental data, data validation results, and any info on errors (eg. gaps)
⚠️ **GitHub.com Fallback** ⚠️