Aphid experiment procedure - Cuddington-Lab/documents GitHub Wiki
Updated January/2023
2 Weeks Prior | 1 Week Prior | Experiment Start |
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- Plant 1 tray of pea plants (one seed per pot) and place in growth chamber in the greenhouse (16:8 light:dark) | - Retrieve 4 plants from the greenhouse growth chambers, place 4 aphids (mature adults without wings) on each plant - Place plants in incubator at 20C (16:8) for 24 hours - After 24 hours, remove adult aphids, leave nymphs to develop for 1 week. |
- Collect 2 week old plants from the greenhouse (9-12 plants depending on how many incubators work) - One round tray goes in each incubator - Three plants per tray - One even-aged adult aphid on each plant (from experimental prep) |
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2 weeks prior: Plant 1 tray of pea plants (one seed per pot) and place in growth chamber in the greenhouse
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1 week prior: 4 plants from the greenhouse growth chambers, 4 aphids (mature adults without wings) on each
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Place plants in incubator 2 at 20C
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Aphids are left on for 24 hours at which point the adults are removed and the plants are returned to the incubator for one week for the next experiment.
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Collect 2 week old plants from the greenhouse (9-12 plants depending on how many incubators work)
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One round tray goes in each incubator
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Three plants per tray
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One even-aged adult aphid on each plant (from experimental prep)
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Set up incubators
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In Celsius:
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Select "Settings", then "log on device" (device numbers are the same as the incubator number), then "OK" from the menu options
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File>load tempering profile>from file>select profile>OK
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Run>start>create log file> name file in the format as others>save
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Check to make sure it is running, there should be a legend in the top right corner
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Repeat steps until all incubators are set up
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Remove trays from the incubator and count aphids on each plant
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Record in lab notebook
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Update spreadsheet and metafile
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Shut down incubators
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In Celsius:
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Run>stop
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File>load tempering profile>from file>select matching profile>OK
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File>load protocol data>from file> select matching protocol> OK
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File>save protocol data> to report>select save to excel file (make sure that all data is in the selected column)...>choose name matching protocol(remove.pro)>OK
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Excel file should open with data
- Confirm that temperature data was recorded
- Add the respective excel protocol files to a new folder and name it
- Run the cat_stats code to perform a data validation for each temperature regime
- Update the metafile and aphid spreadsheet with the experimental data, data validation results, and any info on errors (eg. gaps)
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