Getting started on Trillium - CoBrALab/documentation GitHub Wiki

WIP

Getting started

Sign up for a Digital Research Alliance of Canada account.

Trillium access requires opting-in. In your CCDB account Resources -> Access Systems -> Trillium -> I request access.

You'll need to set up Multifactor Authentication.

Give the Trillium Quickstart a read.

On first login make sure to run

trisetup

Then run this

ln -sf /project/rrg-mchakrav-ab/gdevenyi/quarantine/cobralab-bashrc ~/.bashrc

Software

CoBrALab

module load cobralab will load most software you need.

Access to scratch and project

You will find your scratch and project directories at ~/links/projects and ~/links/scratch

Trillium modules

Documentation on using modules provided by Compute Canada on the Trillium cluster is available here.

If you're looking for something specific, try module spider <name>

Python

Documentation is available on using uv to manage python software (available in cobralab module). See here.

Deformation Based Morphometry

Documentation for running DBM on Trillium is here.

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