Contig info file description - CSB5/OPERA-MS GitHub Wiki
| Column name | Description |
|---|---|
| CONTIG_ID | contig identifier |
| LENGTH | length |
| SHORT_READ_COV | average short-read coverage |
| LONG_READ_COV | average long-read coverage |
| CLUSTER | OPERA-MS cluster that the contig belongs to |
| SPECIES | closest reference species in OPERA-MS database for the assembled contig (identified using Mash) |
| NB_STRAIN | number of strains detected by OPERA-MS for this species |
| REFERENCE_GENOME | species reference ID |