CFA Scenarios Mechanistic Model Documentation

Table of Contents

1. Anticipated Applications
2. High Level Summary
3. Model Structure, Moving Parts, and Customizable Elements
4. Data Sources
5. Software Design
6. Vaccination
7. Waning
8. Introduction of New Strains and External Populations
9. Modifying Beta
10. Contact Matrices
11. Model Epochs and Strain Combination
12. Inference and MCMC
13. Plotting Capabilities
14. Configuration Scripts and Scenario/Epoch specific Configs
15. Appendix

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Contact Us

For code specific questions reach out to:

Ariel Shurygin ([email protected]) or Ben Kok Toh ([email protected]) or Michael Batista([email protected])

For implementation questions reach out to Tom Hladish ([email protected])