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Transcription-modeling
Overview
Analysis of data that represents changes in 3D genome conformation due to interactions with biological entities and the impact they have on transcriptional regulation.
Data from a variety of assays for genomic folding and interactions, including RNA-seq (representing transcription), ChIp-seq/ChIP-exo (representing genome-wide interactions with DNA-binding proteins, usually transcription factors, such as CTCF, WapL, NipB, Cohesin), Hi-C (represent genome-wide chromosome DNA-DNA interactions)
Data from the following publications: